Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq10895 170 2e-37 >seq10895 Length=16309 Score = 170 bits (188), Expect = 2e-37 Identities = 582/894 (65%), Gaps = 30/894 (3%) Strand=Plus/Minus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 |||||| || || || |||||||||||||| || ||||| || | ||||| || | Sbjct 9831 TTTTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGTGAAATCAT 9772 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAG 14031 |||||||||||||||||||| || || || | ||||| ||||| ||||| | | Sbjct 9771 ATCCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAGTTCAACCAA 9712 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || || |||| | || || | |||||| | ||| | | ||||| || || || Sbjct 9711 TAGCCTGTCCGTTACAAATTCCAAATATTGGGTCATCAGTTTTGCGTTCATCCCAATGAG 9652 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 ||||||| | | || | ||| || ||||||| || || | ||| ||| Sbjct 9651 GCTTACAGGTAGGGATTCCGTAATAAACTCGCGTTCTATATCCAAGGCATTTGTTAGAAT 9592 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTT------TAGATGTTTAAAAATTAAACA 14205 ||||| | || || | | | | || | | ||| || | ||| Sbjct 9591 CTGTGTAATCCTCTCCTTGG--GCACCTTGTTGACCAAGTGGTGGTTGTGCAAATGAACG 9534 Query 14206 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 14265 || |||| ||||| | ||| ||||| | ||| | ||| || ||||| || || || Sbjct 9533 -GCGTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCC 9475 Query 14266 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 14325 ||||| || |||| ||| || |||||||| || | | || | ||||||||||| || Sbjct 9474 GGGCATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAAT 9415 Query 14326 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATAT 14385 || || || || ||||| || || |||||||| |||| ||| || || Sbjct 9414 CCCTTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAA----CTTGGGGAATCAAT-- 9361 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATTAA 14444 |||| | ||||| || | ||||| || || | | ||| |||||||| | || Sbjct 9360 CCATCTAAGCGCCCAATCCGCCTTTTTCTTGATGGC-TGGAAAGTTCTCAATAGCCTGAA 9302 Query 14445 ATAA-ATGTTCCTTCTCTTTA-GTACTTGAAAT--GTATGTATCAATAAGTAAGCTATAC 14500 | | ||||| || |||| || ||| | || || | |||||| | | | || Sbjct 9301 AAAGGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAG----TAG 9246 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560 |||| || || ||||| ||||| |||||| || || ||||| | | || || || Sbjct 9245 GTTTCGGAATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAA 9186 Query 14561 CATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 |||| || || | ||||| | ||||||||||||||||| || || ||||| || Sbjct 9185 TATTGGACTTCGTTCACAAAAT-TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGC 9127 Query 14620 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT---TTT 14676 |||||||| ||||| || | ||| |||||||| | || || | || | ||| || Sbjct 9126 GGCAAAAAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTT 9067 Query 14677 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGC 14736 ||| || | |||||||| | | ||| | || || | |||||||||| || || Sbjct 9066 CCAGTCAGATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACA 9007 Query 14737 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790 |||||| ||| | |||| | || | || | || || || | ||||||||| Sbjct 9006 TTTTTTGTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCT 8953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481461159049200