Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7091 96.9 3e-15 >seq7091 Length=10687 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCG-TGACGTG 21004 |||| ||| || ||||||| ||||| || ||||| |||||| || ||||| | | || Sbjct 9422 TAAAGGTGCGCATCACCCAGCGTGTGGACGAAGTC-CCCGGGCTCGAGCCCGCTTGCCTG 9480 Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064 || |||| |||||| || || ||| ||||||||| || || || || || || Sbjct 9481 GGCCATCATCATCGTCAGCAGCGCATAGGAGGCGATGTTGAAGGGCACGCCCAGAAAGAT 9540 Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACA 21124 ||||||| | ||| || ||||||||||| ||| ||| || ||||| ||||| | Sbjct 9541 GTCGGCGCTGCGCTGATAGAGCTGGCAGGAAAGCCGGCCCTCGGCGACGTAGAACTGGAA 9600 Query 21125 CAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGC 21166 || ||||| || || | ||||| ||| ||| ||||| Sbjct 9601 CAGGCAATGACACGGCGGCAAGGCCATGCGCTCGATCTCCGC 9642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427011228751200