Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq9473 84.2 2e-11 seq37644 82.4 8e-11 >seq9473 Length=1265 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || || || |||||||||| ||||||||||| || || || || || Sbjct 1253 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCTT 1194 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| ||| || | | || | | ||| | ||||||||| || | || | Sbjct 1193 GTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGAT 1134 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| ||||| | || || ||||| || ||||| Sbjct 1133 CGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1098 >seq37644 Length=6317 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || || || || || || |||| || | |||||||| || || | ||||||||| Sbjct 4486 TCCTCAAGTTGCTTGCCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTG 4427 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||||||| ||| | | ||| | || ||||| || || || || | || ||| Sbjct 4426 TCTTGAATTTTTTCTTTCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACC 4367 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||||||| ||||||||| | || ||||| Sbjct 4366 GTCTTCCCGGTCAGAGTTTTTACGTAAATCTGCAT 4332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495154404648000