Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq29606 91.5 2e-13 >seq29606 Length=2255 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 6938 CCGTGAGTGAGATGGCCGCC-GCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTT 6996 ||||| || ||||||||||| || | | ||||| | || | || || |||||||| Sbjct 141 CCGTGGGTCAGATGGCCGCCCGCCGAG-AGTGACATGCCCAGGATCGTGTCCCCCGGCTT 199 Query 6997 CAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGC 7056 ||| | || | || | ||| || || || | |||||||| || || ||||| || Sbjct 200 CAGCAAGGCCAGCATGACGGTCTGATTGGCCTGGGCGCCGGAATGCGGCTGGACGTTGGC 259 Query 7057 GAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGC 7116 || |||| ||||| | ||||| ||||| || |||||| |||||| | || | Sbjct 260 AAAGCTGCAGTCGAACAGCTTCTTAGCCCGCTCGATCGCCAGGCTCTCGACCACGTCCAC 319 Query 7117 TTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGT 7173 | |||| ||||| || || || |||||| || || || |||||||||||||| Sbjct 320 ATGCTCGCAACCGCCGTAGTAGCGGCGGCCCGGGTAGCCTTCGGCATACTTGTTGGT 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554344872152400