Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq15353 214 5e-51 seq71963 96.9 9e-16 >seq15353 Length=2468 Score = 214 bits (236), Expect = 5e-51 Identities = 527/775 (68%), Gaps = 32/775 (4%) Strand=Plus/Minus Query 18917 GCCTGGGTCATCAGGTCGATGAGGTCGGCGCCCGCGCTGGCGTTTTTCGTCAGTTCGGAC 18976 |||||| |||| | |||| ||||||||||||| ||| ||||| ||||| | || Sbjct 1371 GCCTGGATCATGAAGTCGTTGAGGTCGGCGCCGGCGGAGGCGTCGGCGGTCAGCGCCGAG 1312 Query 18977 ACGTCCACATTGGCGATGCGGACGACGTAACGCCAGTCGCGCAGGGTCAGGCCGATGTCC 19036 ||||| | ||||| | |||| || ||| |||||||| |||| | ||||||||||||| Sbjct 1311 ACGTCGATGTTGGCCACGCGGCTGATGTAGCGCCAGTCACGCACCGACAGGCCGATGTCC 1252 Query 19037 CACTTGTAGTGGGTGCGGTAGCCCTGGTAGCGGCCGC---CGGCGGCGTCGATCAGCGTG 19093 || | | | |||| ||| ||||||||||| | || |||||||| ||| Sbjct 1251 TGCTCGAACTTCTCCTCGTAGACCTCGTAGCGGCCGCTGTTGTTGGGGTCGATCACCGTC 1192 Query 19094 TCCTCGCCGAGGTC-ACGCGATTGCAGGCCGGCCTGCGAACCCTTCGGGTAGAT--GGTA 19150 | | |||| ||||| ||| |||| |||||| |||| |||||||| ||||| ||| Sbjct 1191 TGCACGCCCAGGTCGGTGCG-CTGCACGCCGGCGCGCGAGCCCTTCGGATAGATCAGGTG 1133 Query 19151 TGCAGGGTGTTCGGCCCCCACACCGTCAGCCAGATGGATGCGTTGTCGCTGCCCGTGCCG 19210 || |||| | ||||| ||| |||||| || | ||||||| ||| ||||| Sbjct 1132 GGC--GGTGGTGTCACCCCAGGTGATCATCCAGATCGAGGTGTTGTCGGCGCCGATGCCG 1075 Query 19211 CCGGCGTCGATGATGTTCTGGCCGTTCTCCGCGGACAGGCTGTTGAAGCGCGGCGTCAGG 19270 ||||| |||| ||| | | ||||||||| || || ||| |||||||||||||| | | Sbjct 1074 CCGGCATCGACGATCTGGTTGCCGTTCTCGGCCGAGAGGTCGTTGAAGCGCGGCGCGAAG 1015 Query 19271 CCCATGAA--CTTCTCGGCGTCGATGCTGGAATCGCCGTAGAACAGCGTGGTCGCCTGGG 19328 || |||| | | |||| ||| ||| ||| | |||||||| || ||| ||| | Sbjct 1014 CCGGTGAAGGCGGC-CGGC-TCGCTGCCGGAGTTGCCGTAGATCACCGT-CTCGGCGATC 958 Query 19329 T-CTGGTTCATGCCTTCGATGAA-GGCGCGGTCTTCGGACAGGCGCCAG--GCGGCGGAA 19384 | ||| |||| || | ||| ||||||| | || ||||| || || || |||| | Sbjct 957 TCCTGCGCCATGGTCTCCAGGAAGGGCGCGGAC-TCCGACAGACG-GAGCTGCTGCGG-A 901 Query 19385 TTGCCGTTGAGGTCGGCCAGGGCCTTGTCCA-CTTCGGCGTAGGTTTCCAGCATCCCCAT 19443 | | | |||||| ||| |||| | ||| | | |||| | || | Sbjct 900 TCGGAGGCAAGGTCGATCAGCTTGCTGTCGATGATCGAC-CGCGCGACCAGGCTGCCGGT 842 Query 19444 GCTGTCCTTGACCTGCACGGTGCGGGACTTCTCGGGCTGCACGCCATAGTTCAGCTTGCG 19503 |||||| |||||| |||| ||||||| || ||| ||||| | || || ||| Sbjct 841 CGTGTCCTCGACCTGACGGGTGTGGGACTTGCTGGTCTGGACGCCCTCGTAGAGACGGCG 782 Query 19504 CCAGGTGCCGGTGGGCAGGCCGCTGCGAACCGTGGTCTTGTGCTCGGTGAAACCG---TT 19560 ||||||| |||| ||||||||| | || ||||||||| ||||| |||| ||| || Sbjct 781 CCAGGTGGCGGTCGGCAGGCCGGTACGCACCGTGGTCAGGTGCTTGGTG---CCGTTATT 725 Query 19561 GGCCTCGATGACGGTCATGTCGTCGAGGATTTCGTTGGTTTCGTTCAGCATTTCGACGAT 19620 | ||||| | | |||||||||||| ||| ||| |||||| |||| ||| Sbjct 724 GCACTCGACCGCCGGAGCGTCGTCGAGGATGGGATTGAACTCGGCCAGCATCTCGATGAT 665 Query 19621 CTGCGGGTCGATCTTGCCGTCCGGGGTCATGCGGGCCGCGACATCGGCCAGCGTC 19675 | ||| | || |||||| || | |||| || || |||||||| ||| Sbjct 664 GT-CGG--CCGTCGTGCCGTTCGCGTCGGTGCGTTTGGCCACGTCGGCCAGGGTC 613 >seq71963 Length=1648 Score = 96.9 bits (106), Expect = 9e-16 Identities = 215/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 21844 TGCAGCGGCGGGTTGCTCTTGTAGTCGATGGCCTGCGCCTTGCGCAGTTGC-TCATGTTG 21902 |||| |||||| ||| || | ||| | ||||| |||||||| ||| ||| | | Sbjct 1117 TGCATCGGCGGATTGACCTGCTTGTCCACCGCCTGACCCTTGCGCTTCTGCATCACCT-G 1059 Query 21903 TAGCTGGCGCACGTCGCCCAAGGCTTCCATTGCGGGGCTGTTGCCGTAGATGTCACCGCC 21962 ||||| | |||||||| | ||||| || || ||| |||||||| ||| | ||| Sbjct 1058 CAGCTGCTTGATGTCGCCCAGCACGTCCATGGCCGGACTGCGGCCGTAGACGTCGCTGCC 999 Query 21963 GACCAAGGCCCAACGCGGGCACAGTGCGCGGAACGAC-CGATAGCCGGATTCGCGCAGCG 22021 | | | ||| ||||| ||| | | || || ||| ||||| ||||||||| Sbjct 998 GGTAACGTACCAGCGCGGCGCCAGCACCGGAAAGGAGTCGA-AGCCGCTCTCGCGCAGCA 940 Query 22022 TGCGGGTTTCGTCGGCGCCTGGCTCGAAATAGACCGACTTCCACGCCATGTTGCGGTCGT 22081 | ||| |||||||| ||| | |||||||| ||| | |||||||| ||| Sbjct 939 GCTTGCCTTCCTCGGCGCCCTCCTCCAGGTAGACCGAGCGCCAGCGCTTGTTGCGGCCGT 880 Query 22082 CGCGCTTGCTCGGG-TCGCGGTCGGCGCGCGGCTCGATGGCGTGAATGACCGTAACCCAC 22140 ||| | || |||| | ||||||| ||| |||||||||||||| | |||| | | | Sbjct 879 CGCCCA-GCGCGGGGTTGCGGTCGCGGCGTGGCTCGATGGCGTGGAAGACCCAGAACTCC 821 Query 22141 TGTTCCAGCGCGCCG 22155 || |||||| ||||| Sbjct 820 TGATCCAGCTCGCCG 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135619346489900