Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq132084 89.7 2e-13 >seq132084 Length=12927 Score = 89.7 bits (98), Expect = 2e-13 Identities = 128/177 (72%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 11200 CACTACCTCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAG 11259 ||| ||||| || | ||| | |||||||| |||| | |||||||||||| | | Sbjct 9673 CACCACCTCTGTCGTATAGCGATCCTGGCCCGACTGGTCAGTCCACTTGCGGGTTTG-AA 9731 Query 11260 GCTG-CCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCA 11318 |||| |||||||| |||| || ||||||||| |||||||| | | | || | ||||| | Sbjct 9732 GCTGTCCTTCGATATAGATCTTGGAGCCCTTGCGCAGGTACTTCTCGGCCACTTCGGAGA 9791 Query 11319 GC---CGGCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGG 11372 || | |||| || || ||||||||||| |||||||| | ||| ||||| Sbjct 9792 GCTTTTCGTTGAAGATAACCACGCGGTGCCACTCAGTGCGCTCGCGGCGCTCGCCGG 9848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208126448388040