Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq25852 93.3 7e-15 seq127204 91.5 2e-14 seq83744 82.4 1e-11 >seq25852 Length=2763 Score = 93.3 bits (102), Expect = 7e-15 Identities = 173/251 (69%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||||||| ||||||||||||| || ||||| | ||||||| |||||| Sbjct 438 CTTCGGGATAACATCCAAAGAATCACCAAGCCCGCCATCCGCAGGCTGGCTCAACGTGGT 497 Query 16514 GGAGTCAAGCG---TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATC 16570 ||||| || | || ||||| | |||| ||||||||||||| || | || Sbjct 498 GGAGTGAAAAGAATTGCCTCTGAA---ATCTACGAAGAGATTCGTGGGGTACTCAAAGAG 554 Query 16571 TTCCTCAAGACCGTTATCCATGATGC--TTTCCACTATACCGAGCACGCTAAACGTAAGA 16628 ||| | || || || |||| || |||| ||| | ||| ||| || | || Sbjct 555 TTCGTGAAACGTGTCGTCAATGACGCCATTTC--GTATGCGGAGTACGGGCAAAGACTGA 612 Query 16629 CTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTT 16688 | || | |||||||| | || ||||||||| || || || | | || || |||| Sbjct 613 CCGTAGTCCCCATGGATGTTGTACGTGCATTGAAGCGCCAGGGGAGGACCATATACGGTT 672 Query 16689 TTGGAAGTTAA 16699 ||||| | ||| Sbjct 673 TTGGAGGATAA 683 >seq127204 Length=3168 Score = 91.5 bits (100), Expect = 2e-14 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||| | || |||| ||| || ||||||||||| || || |||||||| || || Sbjct 1998 CGCCAAGAGACACCGCAAGGTTCTCCGCGATAACATCCAGGGGATTACCAAGCCCGCCAT 2057 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCG---TGTCTCTGGATTGGTCTATGAAGA 16548 ||| ||||| ||||| || ||||| || || | || |||||| |||| || || Sbjct 2058 CCGCCGTCTCGCTCGCCGAGGTGGTGTGAAAAGAATTGCCTCTGG---CATCTACGAGGA 2114 Query 16549 GATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA-TGCTTTCCACTATA 16607 ||| |||| | | ||| |||||| ||| || |||| ||| | | || | ||| Sbjct 2115 GATCCGTGGCATCCTCAAGCAGTTCCTCGAGAACGCCATCCGTGACTCCGTTGC-CTACT 2173 Query 16608 CCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTA 16653 ||||||||| | ||||| ||||||||| | ||| |||| || Sbjct 2174 GCGAGCACGCCCGTAGGAAGACCGTCACCTCCCTTGATGTCGTGTA 2219 >seq83744 Length=1624 Score = 82.4 bits (90), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || ||||||||||| || ||||| | || || | | || || || Sbjct 470 GACAACATCCAGGGGATCACCAAGCCCGCAATCCGAAGACTTGCCAGAAGAGGAGGTGTG 529 Query 16520 AAGCG---TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||| | | ||| || | ||||||| |||||||| | || ||||| |||||| Sbjct 530 AAGAGAATCGCCTCCGG---GATCTATGAGGAGATTCGGGGCATTCTGAAGCAGTTCCTC 586 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| ||| || || | ||| ||||||||| ||| ||||| ||||| Sbjct 587 GAGAACGTCATCAGAGACTCTGTGGCCTACTGCGAGCACGCCCGACGGAAGACAGTCACG 646 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| ||||| | |||||| | || || || ||| | || ||||| |||||| Sbjct 647 TCCCTGGATGTGGTCTATAGCCTCAAGCGACAGGGCAAGACCATCTATGGCTTTGGA 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78941080306170