Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq13327 491 1e-134 >seq13327 Length=3816 Score = 491 bits (544), Expect = 1e-134 Identities = 640/883 (72%), Gaps = 4/883 (0%) Strand=Plus/Minus Query 19392 GCCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCG 19451 || ||| | || |||||||| |||||||| ||||| || |||||||||||||| ||||| Sbjct 2723 GCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCAGTTTCAGGCTCT 2664 Query 19452 TTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGA 19511 | | |||||||| |||||||| || ||||| ||||| || || || ||||| || || Sbjct 2663 CTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCAAATGCTATTGGT 2604 Query 19512 CTGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGT 19571 |||| || ||| || | || || || | | || || || || || ||||| || Sbjct 2603 ATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTGTATAACGGAGGA 2544 Query 19572 CCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAG 19631 || || ||| | ||||| | || |||||||| || |||||| |||| |||| | || Sbjct 2543 CCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATATCTTGGTCGTGAG 2484 Query 19632 TGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCA 19691 || ||| || |||| | ||||||||| | || || || |||||||| | | |||||| Sbjct 2483 TGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCTTTCTCTGCACCA 2424 Query 19692 CTATCAGCAGCTCTTGCTGTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGAT 19751 | ||||||| ||||| ||||| ||||||||| | || ||||| |||| ||| Sbjct 2423 GTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGATCTTTTTCAGAT 2364 Query 19752 GGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAC 19811 || |||||||| || || ||||| || || ||||| ||| | |||||||| ||||| || Sbjct 2363 GGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTCCAGGCAGAGCAT 2304 Query 19812 AATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTT 19871 |||||| | ||||| || ||||||||| || || || || ||||| || |||||| | Sbjct 2303 AATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTTGGAGGATCTTTA 2244 Query 19872 TTCTCTGCTATGCACGGAAGTTTGGTTACTTC--CTCGATCATCAAGGAAACAACTGAGG 19929 || ||||||||| ||| ||| ||||| || || | || | | || | ||| | Sbjct 2243 TTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG--ACTAGTGAAG 2186 Query 19930 ATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCG 19989 ||| ||| | || ||||| ||||| ||||| || || | || ||||||||||| || | Sbjct 2185 ATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATATAATATCGTAG 2126 Query 19990 CTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTT 20049 | || ||||| ||||| ||| | | || ||||||| || ||| ||||| || |||| Sbjct 2125 CCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAATAACTCACGTT 2066 Query 20050 CTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAA 20109 ||||||| ||||| ||||| | || || || ||||| || || | || | ||||||| Sbjct 2065 CTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACAGCAATGGGAA 2006 Query 20110 TCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCA 20169 | | |||||||||||||| || ||||| || || || ||||| ||| | |||||| Sbjct 2005 TTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATCATTGATGCAG 1946 Query 20170 ACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAG 20229 | ||| |||| | | || || ||| | |||||| | || || || ||| | |||| Sbjct 1945 AAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTAGGAATGGAAG 1886 Query 20230 TTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGC 20272 | ||||| ||||| || || || || ||||| || |||||||| Sbjct 1885 TAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144189990857640