Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq5209 143 1e-29 >seq5209 Length=31209 Score = 143 bits (158), Expect = 1e-29 Identities = 714/1113 (64%), Gaps = 88/1113 (8%) Strand=Plus/Plus Query 9027 AAGCAGGCCGCCGCCACCATGCGGATGGGAGGTGGCATCGGCTACGACTTCTCCACCCTC 9086 ||| | ||||| ||| |||| ||| || ||||||||||||||||| |||||||| Sbjct 9720 AAGGAAGCCGCTCTCACGATGCAACAGGGCGGCGGCATCGGCTACGACTTTTCCACCCTG 9779 Query 9087 CGTCCCAACGGAGCCCTCATCAA--GAAGCTCCAGTCGCGGTCCTCCGGGCCGCTCTCCT 9144 || ||||| || ||||| || | ||| | | | || | | ||||| ||||| |||| Sbjct 9780 CGGCCCAAAGGGGCCCTGGTCCACGGAATCGGC-GCCGATG-CATCCGGCCCGCTGTCCT 9837 Query 9145 TCATGCAGATCTACGACTCCGTGTGCAAGTGCGTCGCCAGCTCTGGCCACCGCCGTGGCG 9204 ||||| | ||| || || ||||| | | || ||| | ||| ||||| |||| Sbjct 9838 TCATGGATGTCTGGGATGCCATGTGCCGGACCATCATGAGCGCCGGCTCGCGCCGCGGCG 9897 Query 9205 CGCAGATGGGCGTCCTCCGAGTG-GACCACCCGGACATCGAGGAGTTCATTCGCGCCAAG 9263 | ||||| | ||| | || ||||| ||||||||||| | ||||| |||||| Sbjct 9898 CCATGATGGCCACCCTG-GCCTGCGACCATCCGGACATCGAAGTCTTCATCGAGGCCAAG 9956 Query 9264 CACAACGAGGACAACCTCACCGGGTTCAACACCTCCATCGCCATCACCGACCGCTTCATG 9323 || | || || | |||||| || | ||| |||| ||||||| Sbjct 9957 CAGGAGCCGGGGCGGCTTTCGATGTTCAATCTTTCGGTGCTGGTCAGCGACGCCTTCATG 10016 Query 9324 GAG----TGCGTCATATCTGGCGAGCCCTTCCCTCTCACGTTCGGCGGCGAGACCTATC- 9378 || ||||| | | | |||||| | |||| |||| || | || Sbjct 10017 CAGGCGGTGCGTGAA----GACCAGCCCTGGTCCCTCAGCTTCGAGGGTACGGTTTACAA 10072 Query 9379 GGTCCATCAACGCCGAG-AACCTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCC 9437 ||| || | || | || |||||||| ||||||| |||| | | ||| Sbjct 10073 GGTGGTACA--GGCGCGCAAGCTCTGGGACGGCATCATGCACGCCACCCACGCCGCTGCC 10130 Query 9438 GAGCCCGGCACCCTGTTCATCGACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAG 9497 ||||| ||| | |||||||||| ||||| | ||||| || | ||||||||| Sbjct 10131 GAGCCGGGCGTGATCTTCATCGACCGCATCAATCAGCGCAACAACCTGCACTACTGCGAG 10190 Query 9498 ACCATCGCCGCCACCAATCCCTGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTC 9557 |||||| ||||||||| ||||| ||||| ||||| || || || || || |||||||| Sbjct 10191 ACCATCAGCGCCACCAACCCCTGTGGCGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTG 10250 Query 9558 TTGGGCTCCTTCAACCTCGTCAAGTATGTCAAGCCATTCACGGGCCGGGTG-TTCGTC-- 9614 ||||||| |||| || | | | || |||| | || | Sbjct 10251 CTGGGCTCGATCAATCTGG---------------------CTGCCCTGGTGATCCGGCCT 10289 Query 9615 GTCGGGGCTGACTCC-CGCTGG--ACCTTCGACTGGGA---CCTGTTTGCCACGGATGTG 9668 ||| | |||| || | |||| | | || || ||| |||| | | |||| ||| Sbjct 10290 TTCGAAGATGACGCCGCCCTGGATATCGACGCCTTGGAGGCCCTGGTGCCGACGGCGGTG 10349 Query 9669 TACGCGGTCGTCCGCGCCATGGACAACGTTGTCGACCGGGCCATCTACCCGCTGTTCGAG 9728 | | ||| | |||||| | ||||| || ||| || || || | | Sbjct 10350 CGCATGCTCGACAACGCCAT---CGACGTT-TC--CCG------CTTTCCCCTTGAGGCG 10397 Query 9729 CAGGAGAAGGAGGCCAAGTCCAAGCGCCGCATGGGACTGGGTGTCACAGCCCTCGCCAAC 9788 ||| |||||||| || ||||||| || || || ||||| |||| | ||| ||| | Sbjct 10398 CAGCGCCAGGAGGCCCAGGCCAAGCGGCGGATCGGCCTGGGCATCACCGGCCTTGCCGAT 10457 Query 9789 GCGGCCGAGGCGCT-CGGAATGCCGTACGGCTCCATCGA---GTTTCTCAAGTTCGAGGG 9844 || || || ||| ||| ||| || |||||| ||| | | | || ||| || Sbjct 10458 GC-GCTGATCTGCTGCGGCCTGCGCTATGGCTCCGCCGAAGCGGTGCGCA----CGACGG 10512 Query 9845 ACAGGTCCTGGA-GACG-----CTGGCGTGCAACTCCTATCAGGCCTCCGTCGAGCTGGC 9898 | | ||||| | || | | || || | |||||| |||||||||| | ||||| Sbjct 10513 A---GCGCTGGATGGCGGCCTTCCGCCGGGC--CGCCTATCTGGCCTCCGTCAAACTGGC 10567 Query 9899 CCAGGAGAAGGGCGCGTTCCCGCTGTACGA---CGAGCGCTACCTGGACTCTGAATACG- 9954 ||||||| ||| | |||||||| | ||| ||| ||| |||| | ||| ||| Sbjct 10568 GGAGGAGAAAGGCCCCTTCCCGCTCTTCGACCGCGAAGCCTATCTGGCCGGCGAA-ACGA 10626 Query 9955 TCCGCCAGGTCCTTCCAGAGGAGCTCCAGGAGGACATCGGCCGCTACGGGATACGCAACT 10014 ||||| || || |||||| ||| | || ||||| |||| |||| || |||||| Sbjct 10627 TCCGCGAG---CTGGACGAGGAGATCCGCGCGGGCATCGCCCGCCACGGCATCCGCAACG 10683 Query 10015 CCCACCTCACGTCCATCGCTCCCACAGGGACGATCTCGCTGACGGCGGACAACGTGTCCT 10074 ||| |||| ||| |||| || || || || ||||||||| ||| | |||| | |||| Sbjct 10684 CCCTGGTCACCTCCGTCGCGCCGACCGGCACCATCTCGCTGCTGGCCGGCAACATCTCCT 10743 Query 10075 CTGGCATCGAGCCGGTCTTCAGCTACGGCTATG 10107 | || | |||||||| ||||| | | ||||| Sbjct 10744 CCGGGCTGGAGCCGGTGTTCAGTTTCAACTATG 10776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203188092914900