Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq10895 168 7e-37 >seq10895 Length=16309 Score = 168 bits (186), Expect = 7e-37 Identities = 390/588 (66%), Gaps = 19/588 (3%) Strand=Plus/Minus Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 |||| ||||||| |||||||| | || |||||||| ||||| || || ||||||| Sbjct 9529 AATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCGGGCA 9470 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 |||| ||||| || || |||||||| || || ||| || || ||||||||||| || | Sbjct 9469 TTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATCCCTT 9410 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTA---TGTAGATTCTTTATCCAATATCC 21659 | || || ||||| || | |||||||| | | || || || |||| Sbjct 9409 CCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTGGGGAATCA---------ATCC 9359 Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAA 21719 || | ||||| | ||||||| || || || | |||||||| | |||| Sbjct 9358 ATCTAAGCGCCCAATCCGCCTTTTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAAA 9299 Query 21720 G-ATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCA 21778 | ||| |||||||| | | | || ||| || |||| Sbjct 9298 GGATG-TTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCG 9240 Query 21779 GAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGA 21838 ||||| || || || ||| |||||| ||||||||||| | | ||||| ||| |||| Sbjct 9239 GAATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGG 9180 Query 21839 ACCTCGGA-ATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAA 21897 || ||| | ||||| | | ||||| ||||||||||| || ||||| |||||||| Sbjct 9179 ACTTCGTTCACAAAATTCTCG-GCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAA 9121 Query 21898 AAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT---TTTCCAATC 21954 ||| ||||| |||| ||||||||| || ||||||| || ||||||| ||||| || Sbjct 9120 AAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTTCCAGTC 9061 Query 21955 TAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTT 22014 ||||||| | |||||| | || || | |||||||| | || | ||||| Sbjct 9060 AGATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACATTTTTT 9001 Query 22015 ATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 ||| ||| | ||| | || | || || ||||||||||| || Sbjct 9000 GTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCT 8953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530925493395600