Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10895 248 2e-60 >seq10895 Length=16309 Score = 248 bits (274), Expect = 2e-60 Identities = 1152/1810 (64%), Gaps = 49/1810 (3%) Strand=Plus/Plus Query 363089 AGGGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAA 363148 |||| || |||||||||||||| ||| || | |||||| | |||| || || Sbjct 10136 AGGGACTTTATGATGGTGTTACCACTTCGGAGTTGGACAATTTGGCCGCCGAGCAGGCTG 10195 Query 363149 CTTATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGT 363208 || |||||| |||||||| ||||| | ||| |||| ||||| ||| | ||||| Sbjct 10196 CTACCATGACCACTACGCATCCGGATTATGCAAAATTGGCCGCTCGTATTTCCGTTTCCA 10255 Query 363209 CTCTTCATAA-AATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTAT 363267 | | ||||| ||| || |||| ||| | || |||| | | |||| | ||| Sbjct 10256 ATTTACATAAGAATACCAAAAAATCCTTTTCCGAGAC-CATGAAGGATTTGTACGAGTAT 10314 Query 363268 GTCAATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACAT-TATTGAATGTA- 363325 | ||| | | || ||||| | || || || ||||||| | ||| || ||| Sbjct 10315 ATAAATCCCAGAACGGGTAAAAAAGCCCCGCTTCTTTCCGATGAGGTCTAT--AAGGTAA 10372 Query 363326 --TCCGTTCTAATGCGGAAGTTTTCGAT--GACGTTATCAATTATGAGAAGGATCTCGAG 363381 |||| ||| ||||| | ||| ||| ||||| || | ||| | | Sbjct 10373 TTTCCGAA--AATTCGGAAAAACTGGATTCGAC--TATCATATACAATCGTGATTTTGGA 10428 Query 363382 TATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGAT 363441 || ||| ||||| | ||||| ||||| |||||| || | | || || | Sbjct 10429 TACGATTACTTCGGCTTCAAGACCTTGGAGCGATCCTATCTCCTTAAGCTGAACGGGAAG 10488 Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || | ||||| || ||||||||||| ||||| ||||| |||| ||||| | ||| Sbjct 10489 ATAGCCGAACGGCCCCAGCATATGTTGATGCGCGTTGCGGTTGGAATCCACTTAAATGAT 10548 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGC 363557 | || | || || ||||| ||| |||| || || | | |||| || || Sbjct 10549 ATGGACTCTGCCATAGAAACCTATGAGCTGATGTCAAAAAAATATT----TCACCCATGC 10604 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 || || || | | ||| | ||||| | || || |||||||| || ||||| || | Sbjct 10605 AACACCTACCCTCTTCAACTCCGGAACGCCCAAGCCGCAGATGTCCTCCTGCTTCCTATT 10664 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 ||||||||||| ||||| ||||| | ||||| | ||| | || || Sbjct 10665 GGCCATGAAGGACGACAGTATCGATGGTATTTACGACACCTTGAAGCAGACCGCGAAAAT 10724 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGT 363735 ||| | ||| || ||||| || | || || ||||||||||| || || | | || Sbjct 10725 CTCCCAATCTGCGGGGGGAATCGGACTTTCCATTCACAATGTTCGGGCTACGGGATCA-- 10782 Query 363736 TACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 || || ||| || || |||| | ||||| | || || ||||| | || ||| | Sbjct 10783 TATATAGCCGGTACCAATGG-TACTTCCAATGGTATTGTCCCTATGCTAAGGGTATTTAA 10841 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | || || | ||||| || || || || || ||||| ||||| ||||| || || Sbjct 10842 TGACACGGCACGCTACGTTGATCAAGGAGGCGGGAAGCGAAAAGGAAGTTTTGCCATTTA 10901 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | | |||||| ||||| ||||||||||| ||| | || | ||| ||| ||||| Sbjct 10902 TGTAGAGCCTTGGCATGCGGATATTTTTGACTTTTTGGAATTGAAGAAGAACCACGGAAA 10961 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 || ||| ||||||| |||||||||||||| || | ||| || | || || ||||| Sbjct 10962 GGAAGAAATGCGTGCCCGTGATCTGTTCTACGCCATGTGGATTCCAGATTTGTTCATGAA 11021 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGG--TCTT 364032 |||||||||||| | | ||||| | | | ||||| | ||||||||||| | || Sbjct 11022 GCGCGTGGAGGCCAATGAAGATTGGACCTTAATGTGCCCCAATGAATGTCCAGGATTGTT 11081 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 | | | | |||| || | || ||||| || ||||| | |||| ||| Sbjct 11082 TTCAAATCA--CAGTGAGGAATTTGAAAAACTATATTTGAAATATGAGGCAGAGGATAAG 11139 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | ||| || || | || | | ||||| || |||| || ||||||||| Sbjct 11140 GGTCGCAAAACGGTAAAGGCCAGGGATTTATGGGAAAAAATATTGGAATCCCAGATTGAG 11199 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || ||||| ||||||||| | || || ||| || ||| || || ||| ||| || || Sbjct 11200 ACGGGAACGCCCTATATGCTTTATAAGGATGCGGCCAATCGTAAAAGCAATCAGAAGAAC 11259 Query 364213 CTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 | ||||| || | ||| || ||||||||||| | ||||| ||| | ||||| Sbjct 11260 TTGGGTACTATCCGATCTTCCAATCTTTGTACCGAGATATTGGAATATACCTCCCCCGAT 11319 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACT 364332 || || || |||||| | || || || || ||||| |||||| |||| || | Sbjct 11320 GAAGTAGCGGTTTGTAACTTGGCCTCTATAGCTCTTCCCATGTTTGTTAAAGGGGGCAAA 11379 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTT 364392 ||||| ||| || | | | | || || | | | || || || | | ||| Sbjct 11380 TTTGATCACAAGGAATTGTTCAAGGTTACAAAACGGGTGACCAAGAACCTTAATAGGGTC 11439 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 || || | |||||| || || | ||||| || ||| |||||||| ||| | || Sbjct 11440 ATTGATAGGAATTACTACCCCGTAAAGGAAGCGGAAAATTCCAATATGCGCCATAGGCCA 11499 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGA---CGTTTTTATGATGCTCAAGATGGCATTT 364509 || ||| | || || || || || || || | || ||||| ||| | | || || Sbjct 11500 ATAGGTTTGGGAGTCCAAGGACTGGCAGATACCTTTATTATGTTGC----GTTTGCCCTT 11555 Query 364510 GATTCG-CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGC 364568 | | ||| || | | || | ||||| |||||||| |||| | |||||| Sbjct 11556 TACCAGTGATGAGGCCAAGGAATTGAACCAAGAGATTTTTGAAACCTTGTACTATGCCGC 11615 Query 364569 AATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628 | || ||||| || ||| ||| ||||| |||||| | | | |||| || Sbjct 11616 GGTTACCGCTTCTATGGAGGAGGCCAAAGTAGAGGGAGCCTACTCTTCCTTTAAGGGCTC 11675 Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG---------CCATC 364679 || |||| | || ||||| || | |||| ||| | ||| | | || Sbjct 11676 ACCAATTTCAGAAGGGAAATTTCAACATAATCTTTGGGGTATCAAGGACGAAGAACTTTC 11735 Query 364680 TGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC 364739 | ||| ||| ||||||| | | || | || | || ||||| |||||||| Sbjct 11736 GGGCCGTTGGGACTGGGAAAAATTGCGCAAGCAGGTCATAAAAAATGGTGTGCGCAACTC 11795 Query 364740 CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTG 364799 ||| | || |||||||| || || ||||| | || || || || ||||||||||| Sbjct 11796 CCTGTTGGTCGCTCCCATGCCTACCGCGTCTACATCCCAAATACTGGGGAACAACGAGTG 11855 Query 364800 CTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859 || || || | || ||| ||||| | | |||| | ||||| || ||| || Sbjct 11856 TTTTGAGCCCTACACCTCCAACATTTATACCAGAAGGGTATTGTCCGGGGAGTTTATCGT 11915 Query 364860 AGTTAATAAG 364869 ||| |||||| Sbjct 11916 AGTGAATAAG 11925 Score = 109 bits (120), Expect = 1e-18 Identities = 343/526 (65%), Gaps = 9/526 (2%) Strand=Plus/Plus Query 22424 TTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCAT 22483 ||| | | || ||||| ||||| ||||||||||| | |||||| | | ||| Sbjct 9320 TTCCAGCCATCAAGAAAAAGGCGGATTGGGCGCTTAGATGGATTGATTCCCCAAGTT--- 9376 Query 22484 TCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTT 22543 | || ||||| | || || ||||| | || ||||| ||||||||||| || || |||| Sbjct 9377 TTGCCGAACGATTGATCGCCTTTGCCGCTGTGGAAGGGATTTTCTTTTCCGGGGCTTTTT 9436 Query 22544 GTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGT 22603 || | || |||||| | || ||| | | | ||||| || | || ||||| ||||| | Sbjct 9437 GTTCCATTTTTTGGTTGAAGAAAAGAGGGTTAATGCCCGGGTTGACTTTTTCCAATGAAT 9496 Query 22604 TAATTAGCCGAGATGAGGGTCTTCATACCGATTTTG-CGT--GTATGCTATATCGGAATC 22660 | ||| ||| ||||| || | ||| ||||| | ||| | ||| | | | | | Sbjct 9497 TGATTTCCCGTGATGAAGGCATGCATTGCGATTACGCCGTTCATTTGC-ACAAC--CACC 9553 Query 22661 ATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAAC 22720 | | | | || | || | || | | | ||| | |||||||| | || Sbjct 9554 ACTTGGTCAACAAGGTGCCCAAGGAGAGGATTACACAGATTCTAACAAATGCCTTGGATA 9613 Query 22721 TTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAAT 22780 | ||||| |||||| || | |||| ||||| |||||||| || || || || Sbjct 9614 TAGAACGCGAGTTTATTACGGAATCCCTACCTGTAAGCCTCATTGGGATGAACGCAAAAC 9673 Query 22781 CAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAA 22840 |||| |||| | ||||||| | || | ||||| || ||| | || || Sbjct 9674 TGATGACCCAATATTTGGAATTTGTAACGGACAGGCTATTGGTTGAACTTCAATGTGAAA 9733 Query 22841 AGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGA 22900 | ||||| ||||||||||| | ||||| | |||||||| | || || | Sbjct 9734 AAGTATATAATTCTACCAATCCATTTGATTTTATGGATATGATTTCACTACAGGGGAAAA 9793 Query 22901 CCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGT 22946 |||||||||| |||||||| || || ||||||||||| ||||| Sbjct 9794 CCAATTTCTTTGAAAAAAGGGTCTCCGAGTACCAAAAAGCCGGTGT 9839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300903991711580