Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq37644 93.3 4e-14 >seq37644 Length=6317 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || | ||||| ||| ||||||| || | |||| | || || || | || Sbjct 4331 AATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTC 4390 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| | || || | |||| ||||||| ||||||||||||| || ||||| || Sbjct 4391 CGACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGACCCCGCCTGATCA 4450 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | |||| || || ||||| ||| | || |||| || ||| | ||| ||||| Sbjct 4451 GCAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACAA 4510 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||| | || |||||||| || | || || || |||| Sbjct 4511 TATTGAGAAGGAATCCACCCTCCGCTTGGTTCTTCGGCT 4549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432553302972350