Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10895 208 8e-49 >seq10895 Length=16309 Score = 208 bits (230), Expect = 8e-49 Identities = 396/572 (69%), Gaps = 21/572 (4%) Strand=Plus/Minus Query 93113 CCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTC 93172 ||||| || || || ||||| |||||| || || || || || | | |||| |||| Sbjct 9515 CCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCGGGCATTAACCCTCTTTTC 9456 Query 93173 TTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAAT 93232 || | |||||| || ||| |||| || ||||| || || |||||||| || ||||| Sbjct 9455 TTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATCCCTTCCACAGCGGCAAAG 9396 Query 93233 GCCA-CAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATC 93291 || | |||| |||||||||||| ||| ||||| | |||||| | | |||||||| Sbjct 9395 GCGATCAAT-CGTTCGGCAAAACTTGGGGAATCA------ATCCATCTAAGCGCCCAATC 9343 Query 93292 GGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTC 93351 || |||||||| || || | | || ||||| | ||| ||| | | || | Sbjct 9342 CGCCTTTTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAAAGGATGTTTTTTTCCTT 9283 Query 93352 CGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCAT 93411 || || || || || || ||||| || || |||| ||||||| |||||||| Sbjct 9282 TTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCGGAATGGATGTTCTCCAT 9223 Query 93412 TGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTGAGAAAATC 93470 || ||||||||||| || | | || |||| || ||||| || | ||||| Sbjct 9222 CATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGGACTTCGTTCACAAAAT- 9164 Query 93471 TCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCT 93530 |||| | | ||||||||| || || ||||||||||| |||||||| ||||| ||||| | Sbjct 9163 TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAAAAAGGCCAAGATATGTT 9104 Query 93531 TTATAA---AATGTTTCTCATCATCTTTAAGCTTATC---CCAATCGGATAGAT-CTTTT 93583 |||||| || ||| || ||| ||| | ||||| ||| || |||| || || | Sbjct 9103 TTATAAAGTAACGTTCGTCGTCA-CTT--AATTTATCGTTCCAGTCAGATAAATCCTGAT 9047 Query 93584 GAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCAT 93643 | || ||| | || ||| | |||||||| | || || |||||||||| ||||| Sbjct 9046 GTAA-ATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACATTTTTTGTACCATTCCCAC 8988 Query 93644 ATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | || |||| || ||| || ||||| ||||| Sbjct 8987 AAATCGTGATGTTCAATGGGGAATATTACAAA 8956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555839726115600