Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq10895 131 2e-25 seq34284 114 2e-20 >seq10895 Length=16309 Score = 131 bits (144), Expect = 2e-25 Identities = 1041/1665 (63%), Gaps = 80/1665 (5%) Strand=Plus/Minus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 ||||||||||| || || | || ||||| ||||| | |||||| |||| ||| ||| Sbjct 12221 TAGTACATCCCTGTTTTTAAACCGCTTTTCCAAGCATAAAAATGCATAGAGGTCAATTTG 12162 Query 113663 GAGAGTGTTGG-ACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721 || | ||||| | ||||||| || | |||| |||| || || ||||| || Sbjct 12161 GA-ATAGTTGGCATTTTCCATAAACAAATTCAACGATTGGCTCTGGTCAATGAAATACCC 12103 Query 113722 ACGATCCGCCGC-CATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGA 113780 || | | || ||||||||| | ||| ||||| ||| ||||| || ||| | || | Sbjct 12102 TCGCTGA-CGGCTCATATCAATAATATCTTTCATACTGAGCTCCCAAACCGTTTTATACA 12044 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 | ||||||| ||| || || | || | || ||||||||| || | || Sbjct 12043 ATTCCTTAATACTATCGGGAATTATATCAATGTGCTGAATGGAGCCATTGGC---GCGCA 11987 Query 113841 TGAGATCCT-TCATATCCTTTGA--CCAGAGACCAATCTTTTTGAGATCCTCCACGAGAT 113897 | | |||| | || ||| | ||| | || | ||| | ||| |||| ||||| Sbjct 11986 TCAACTCCTGTTTTAGGTTTTCATTCCAAATTCCGAGTTTTACCAAATCTTCCAAGAGAT 11927 Query 113898 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 113957 ||||||| || || | |||||| || | | | ||| ||| || |||| |||| Sbjct 11926 GCTTATTCACTACGATAAACTCCCCGGACAATACCCTTCTGGTATAAATGTTGGAGGTGT 11867 Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTG 114017 | |||||||| ||||| ||||| |||| ||||||| || || || || |||||||| | Sbjct 11866 AGGGCTCAAAACACTCGTTGTTCCCCAGTATTTGGGATGTAGACGCGGTAGGCATGGGAG 11807 Query 114018 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT---CCC 114074 | | | ||| ||| || | ||| |||| | ||| | |||| | | ||| Sbjct 11806 CGACCAACAGGGAGTTGCGCACACCATTTT---TTATGACCTGCTTGCGCAATTTTTCCC 11750 Query 114075 AGTCGTAGTTG------AG--CTTTGTCTCCCCCTG-----CCACATATCAAACTGGAGG 114121 |||| | | || ||| ||| | || ||| | || | || | Sbjct 11749 AGTCCCAACGGCCCGAAAGTTCTTCGTC----CTTGATACCCCAAAGATTATGTTGAAAT 11694 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAAC------CTCC 114175 | |||| || ||| || |||| ||| | ||| | ||||| || |||| Sbjct 11693 TTCCCTTCTGAAATTGGTGAGCCCTTAAAGGAAGAGTAGGCTCCCTCTACTTTGGCCTCC 11634 Query 114176 GCCAATTCGGAGC--TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 ||| | | ||| | || || || | |||| || |||||||| | Sbjct 11633 TCCA--TAGAAGCGGTAACCGCG------GCATAGTACAAGGTTTCAAAAATCTCTTGGT 11582 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 114293 ||| | |||||||||| || ||| | | || ||| |||||| ||| || | Sbjct 11581 TCAATTCCTTGGCCTCATCACTGGTAAAGGGCAAACGCAACATAATAAAGGTATCTGCCA 11522 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 114353 | |||||||| || | || ||||| | ||| | |||||| || ||| || || | Sbjct 11521 GTCCTTGGACTCCCAAACCTATTGGCCTATGGCGCATATTGGAATTTTCCGCTTCCTTTA 11462 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413 |||| || |||||||||| || |||||||| || || ||||| || ||||| | | Sbjct 11461 CGGGGTAGTAATTCCTATCAATGACCCTATTAAGGTTCTTGGTCACCCGTTTTGTAACCT 11402 Query 114414 CATGAAGCTTTTC--GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 114471 |||| || | || |||||| ||| | ||| | ||| || | ||||| || Sbjct 11401 --TGAACAATTCCTTGTGATCAAATTTGCC---CCCTTTA---ACAAACATGGGAAGAGC 11350 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 || || |||| ||||| || | ||||| || || || | || || || Sbjct 11349 TATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAGGTATATTCCAATATCTCGGT 11290 Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TTACACG 114590 ||| | ||| ||| || || ||||||||||| ||| ||| ||| | || || Sbjct 11289 ACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGA-TTGCTTTTACGATTGGCCG 11231 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||| |||||||| || ||||| |||||||| | ||||| | | || | || Sbjct 11230 CATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGGGATTCCAATATTTTTTCCC 11171 Query 114651 AGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC----CCTCCTCCTCGTACTTTGTG 114706 | | ||| ||| || || || || || |||| |||| || || Sbjct 11170 ATAAATCCCTGGCCTTTACCGT----TTTGCGACCCTTATCCTCTGCCTCATATTTCAAA 11115 Query 114707 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC---CCTGGTGCCTTATCTGGG 114763 || || |||||| || |||| | | ||| | | ||||| | || ||| Sbjct 11114 TATAGTTTTTCAAATTCCTCAC---TGTGATTTGAAAACAATCCTGGACATTCATTGGGG 11058 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 || | | | ||| | || |||| || ||||||||||| | ||||| ||||| Sbjct 11057 CACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAACAAATCTGGAATCCAC 10998 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 | || |||| ||||| || || |||||| | || || || ||| ||| Sbjct 10997 ATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGGTTCTTCTTCAATTCC 10938 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA 114943 |||||||| | |||||||| ||||| || || | || | || | || || || Sbjct 10937 AAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCAAAACTTCCTTTTCG- 10879 Query 114944 CGACCAGCC----TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | || ||| || | || || | || ||| |||||||||| | ||||| || | Sbjct 10878 CTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACCCTTAGCATAGGGAC 10819 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 ||||||| || ||||| || || ||| || | || | |||| || Sbjct 10818 AATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCGTAGCCCGAACATTGTG 10759 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 ||| | || || ||||| || | | ||||||| |||| || | | | || | Sbjct 10758 AATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGGTCTGCTTCAAGGTGTC 10699 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||| || || ||||| ||| |||| | || | ||||||||| ||||| || || Sbjct 10698 GTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGCAGGAGGACATCTGCGG 10639 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 | | || || || | |||||||||||| ||||| || ||| |||| Sbjct 10638 CTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGAA 10594 >seq34284 Length=3714 Score = 114 bits (126), Expect = 2e-20 Identities = 108/137 (79%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 29080 ATGCCCAAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATT 29139 ||||| |||||| | ||||| ||||| ||||| |||||| | |||||||||||||| || Sbjct 2440 ATGCCGAAGAAAATTTGGTACGCGCCAAACAAGTTTGAAGCCTATGGGGAGGAAGAGATA 2381 Query 29140 AAAGCCGTTGAGGCTTGCCTTCGAGATGGCTGGCTCGCTGGCTTTGGTGATCGCACTATG 29199 ||||| || ||| | |||||||||||||||||||| || | ||| ||| || | Sbjct 2380 AAAGCTGTGGAGTCCTGCCTTCGAGATGGCTGGCT---TGCCCCCGGTCCTCGAACGGCG 2324 Query 29200 GAGTTTGAGAAGAGGGT 29216 ||||||||| ||| ||| Sbjct 2323 GAGTTTGAGGAGAAGGT 2307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596258277505200