Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq34641 104 9e-18 seq3129 91.5 6e-14 >seq34641 Length=3881 Score = 104 bits (114), Expect = 9e-18 Identities = 173/246 (70%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 6426 CATGAGTGACGTTGGCGAAATCGCCGCCGACCGCCTGAAATCCTTCGTCGAAAGAATAGA 6485 |||||| ||||| || | | || || || || ||||| || ||| |||| | || || Sbjct 3622 CATGAGCGACGTCGGTGGCGTAGCAGCGGATCGTCTGAAGTCTTTCATCGAGCGCATCGA 3563 Query 6486 ACGACTTGAGGAGGAAAAGAGCG---GTCTCCAGGAG--GACATCAAGGAAGTCTACTCG 6540 ||| || || || |||||| | | | || | || ||| || ||||| | Sbjct 3562 ACGGCTCGAAGA-----AGAGCGCACGGCCCTGGGTGCCGATATCCGCGAGATCTACGCC 3508 Query 6541 GAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCATCCGCTTGCGGAAG 6600 |||||||||||||| || |||||| |||||||| |||||| ||||| ||||||| Sbjct 3507 GAAGCCAAGGGCACGGGCTTCGACACGAAGATCATGCGGCAGGTCATCAAACTGCGGAAA 3448 Query 6601 ATGGACAAGGCCGACCGGCAGGAACAGC-GCGCCATCCTCGAAATGTACGAGGAAGCGCT 6659 ||||| | |||||| ||||||| ||| || || | || || ||||| || ||||| Sbjct 3447 ATGGATCATGCCGACAGGCAGGAGCAGGAGCACC-TGCTGGAGCTGTACAAGCGCGCGCT 3389 Query 6660 CGGGAT 6665 |||||| Sbjct 3388 CGGGAT 3383 >seq3129 Length=43554 Score = 91.5 bits (100), Expect = 6e-14 Identities = 176/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 6425 GCATGAGTGACGTTGGCGAAATCGCCGCCGACCGCCTGAAATCCTTCGTCGAAAGAATAG 6484 ||||| ||| || |||| ||| || ||||| || ||||| ||||||| || | Sbjct 20045 GCATGGCTGATGTCGGCGGCGTCGGGGCGGACCGTTTGCGGTCCTTTATCGAAAGGATCG 19986 Query 6485 AACGACTTGAGGAGGAAAAGAGCGGTCTCCAG-GAGGACATCAAGGAAGTCTACTCGGAA 6543 | || || || ||||| ||| |||| | | | ||| ||| || || || | ||| Sbjct 19985 AGCGTCTCGAAGAGGAGAAG-GCGGCCCTGACCGCGGATATCCGCGAGGTTTATGCCGAA 19927 Query 6544 GCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCATCCGCTTGCGGAAGATG 6603 |||||||| || || ||| |||| |||| || |||||| ||||| |||| || ||| Sbjct 19926 TCCAAGGGCGAAGGCTTTGACACCAAGGTCATGCGCCAGATCGTCCGCCTGCGCAAAATG 19867 Query 6604 GACAAGGCCGACCGGCAGGAACAGCGCGCCATCCTCGAAATGTACGAGGAAGCGCTCGGG 6663 || | |||||| ||||| ||| ||||||||||| | || | | || ||||| Sbjct 19866 GATTCCGGCGACCGCCAGGAGCAGGAAGCCATCCTCGACCTCTATAAACAGGCCCTCGGC 19807 Query 6664 ATGACGGAGTGAGGAC 6679 ||| | | || ||||| Sbjct 19806 ATGGCTGGGT-AGGAC 19792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198997198748820