Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq2293 149 9e-31 >seq2293 Length=89781 Score = 149 bits (164), Expect = 9e-31 Identities = 489/746 (66%), Gaps = 18/746 (2%) Strand=Plus/Minus Query 41381 CAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAA 41440 || || || || || || |||||||||||||||| || | || | ||| | |||| Sbjct 22604 CACCTCGGGACCCTCGGCACCGGCAACCACTTCATCGAGATCTGTCTCGACGAAGCGCAG 22545 Query 41441 GACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCGGCCGTCAC 41500 | ||| | ||||||||| ||| ||||| | |||||| ||||||| | | Sbjct 22544 CGGCTCTGGGTGATGCTGCATTCCGGCAGCCGCGGCATCGGCAACCGCATCGGCAGCTAT 22485 Query 41501 TACAT---CGAG-CGTGCGCAGAAGGAGTGCGGCATGT-GGCACAGCAGCC-TGCCGCAC 41554 | ||| |||| || | | || |||||| | || | || || ||||| || Sbjct 22484 TTCATTGCCGAGGCGCGTGAAGCCTTGCTGCGGCGCGACGGGGCGGCCGCGGTGCCGGAC 22425 Query 41555 AACGATCTCGCGTTCTTCCCTGAGGACACTCCGGGCTTCAATCACTACGTCCTGTCCATG 41614 || ||||| | ||| |||| | || |||| | |||| ||| | | | Sbjct 22424 CGGGACCTCGCCTGGTTCGAGGAGGGCGAAGCGCTCTTCGACGACTATGTCGAGGCGGTA 22365 Query 41615 CTGTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATCCAA 41674 || ||||| ||||||||||| || ||| || | ||||||| || | || | || Sbjct 22364 CTCTGGGCCCAGGACTTCGCCTGGGCGAACCGCGAGGTGATGATGGGGCGGGTCCTGCAG 22305 Query 41675 GCGCTGCGTCGTCATCTGCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCAC 41734 | |||||| ||| | ||||||||| | | | | || || ||||||||||||||| Sbjct 22304 GTGCTGCGCGATCACTTTCCGGCCTTCCGGGTCGAGAAGGAAGCCGTGAACTGCCACCAC 22245 Query 41735 AACTATTGTGAGCA-GGAGAACCACTTCGG-GCGCAACGTGTGGGTCACGCGCAAGGGTG 41792 |||||| ||| || |||| ||||||| ||| || || ||||| ||||||||||| | Sbjct 22244 AACTAT-GTGGCCAAGGAGCGGCACTTCGATGCGGAA-GTCTGGGTGACGCGCAAGGGCG 22187 Query 41793 CGGTTCGTGCACGTGAAGACGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTCGT 41852 | || ||||| | ||||| |||||||||| || || |||||||| || || | Sbjct 22186 CAGTGCGTGCGGGCCGGGACGAGTTGGGGATCATCCCCGGCTCCATGGGCGCGCGCTCCT 22127 Query 41853 ACATCGTCAAGGGCAAGGGCAATCCGCATTCGTACTGCTCGTGCAGTCACGGGGCAGGAC 41912 |||||||| || ||||| | | || | | || ||| |||||||| || | Sbjct 22126 ACATCGTCCGTGGGCTCGGCAACGCCGAGTCCTTCCAGTCCTGCTCCCACGGGGCGGGGC 22067 Query 41913 GCCGTATGTCGCGCACCGAGGCCGTCAAG---CGATTCACCGTCGAAGACCTCGT-GCAG 41968 || | ||| || | ||||| ||| || |||||| | | |||| | | || | Sbjct 22066 GCAGCATGAGCCGGTCTGAGGC---GAAGCGCCGCTTCACCTTGGCCGACCACATCGCCG 22010 Query 41969 CAGACGCAGGGTGTTGAATGCCCGAAGACCAAGGAAGTGCTGGATGAAATCCCGGCCGCG 42028 | || |||| || ||||||| ||| | ||| || | || || | ||| || || Sbjct 22009 C-CACCGAGGGCGTCGAATGCCGCAAGGACCAGGGGGTCATCGACGAGACCCCCGCGGCC 21951 Query 42029 TACAAGGACATCGATCAGGTGATGCTTGACCAAAGCGATCTGGTGGAAGTCGTTCATACG 42088 |||||||| ||||| || ||| | ||| |||| ||||||| || | || || Sbjct 21950 TACAAGGATATCGACGCCGTCATGGCCGCCCAGCGCGACCTGGTGGCGGTGGAACACACC 21891 Query 42089 CTGAAGGCCGTTCTCAACGTGAAAGG 42114 |||||| || || ||||||||| Sbjct 21890 CTGAAGCAGGTGGTCTGCGTGAAAGG 21865 Score = 118 bits (130), Expect = 2e-21 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 40953 AGAACATCACCCGACTGCCCTTCATCCATCCGCACGGCGTCGCGTTGATGCCGGACGCGC 41012 |||||||| | || ||||| ||||||||| | |||| | ||| ||||| |||| | Sbjct 22981 AGAACATCGCGCGGCTGCCGTTCATCCATTCCCACGTTGCCGCC---ATGCCTGACGTTC 22925 Query 41013 ACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACGCAAGGTGCCATCATTCCGG 41072 | ||| ||| |||||| || ||||||||||| || | ||||| ||| | |||| Sbjct 22924 ATCTCGGCCGTGGCGCCACGGTGGGTTCGGTGATCGCCACCAAGGGTGCGATCGTGCCGG 22865 Query 41073 CGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGCGGTTCGTACCAGTCTCAAGGCCA 41132 ||||||| ||||| |||||||||||||| ||| ||||| | || ||| ||| ||||| Sbjct 22864 CGGCGGTCGGCGTCGACATCGGCTGCGGTATGATGGCGATGCGGACCTCGGTCACGGCCA 22805 Query 41133 GTCAGTTGCCGGAC 41146 ||| | || ||| Sbjct 22804 CGCAGCTTCCCGAC 22791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738531322866000