Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq10895 156 4e-33 seq83140 138 1e-27 seq15169 100 3e-16 seq983 82.4 8e-11 >seq10895 Length=16309 Score = 156 bits (172), Expect = 4e-33 Identities = 325/483 (67%), Gaps = 1/483 (0%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| | || || ||||| |||||| | || || || ||| |||||||| || || | Sbjct 10599 CCATG-CAACACCTACCCTCTTCAACTCCGGAACGCCCAAGCCGCAGATGTCCTCCTGCT 10657 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 |||| || | | |||| |||| ||| || |||| ||||| | | ||| | | Sbjct 10658 TCCTATTGGCCATGAAGGACGACAGTATCGATGGTATTTACGACACCTTGAAGCAGACCG 10717 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 ||| ||||| ||| |||||||||||||| | | ||| | || || || | || Sbjct 10718 CGAAAATCTCCCAATCTGCGGGGGGAATCGGACTTTCCATTCACAATGTTCGGGCTACGG 10777 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || || || |||||||||||| || ||||| || | ||||||||||| |||| | Sbjct 10778 GATCATATATAGCCGGTACCAATGGTACTTCCAATGGTATTGTCCCTATGCTAAGGGTAT 10837 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 | || || |||| |||||||| || || || || |||| | | || || ||| || Sbjct 10838 TTAATGACACGGCACGCTACGTTGATCAAGGAGGCGGGAAGCGAAAAGGAAGTTTTGCCA 10897 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 | ||| | ||||| ||||| ||||| | | || | || || |||||||||| Sbjct 10898 TTTATGTAGAGCCTTGGCATGCGGATATTTTTGACTTTTTGGAATTGAAGAAGAACCACG 10957 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 | || || | | ||| | || || |||||||| | ||| | ||||| | || | Sbjct 10958 GAAAGGAAGAAATGCGTGCCCGTGATCTGTTCTACGCCATGTGGATTCCAGATTTGTTCA 11017 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| ||||| ||| || | |||| | | || |||||||||||||| ||| Sbjct 11018 TGAAGCGCGTGGAGGCCAATGAAGATTGGACCTTAATGTGCCCCAATGAATGTCCAGGAT 11077 Query 94367 TGT 94369 ||| Sbjct 11078 TGT 11080 >seq83140 Length=1468 Score = 138 bits (152), Expect = 1e-27 Identities = 321/479 (67%), Gaps = 4/479 (1%) Strand=Plus/Minus Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 || || || ||||| ||||| || || || | | ||||| || ||||| |||| || Sbjct 1452 GCAGCCCGGTACGTCGACCAAGGAGGAGGCAAACGCAAGGGCTCCTTCGCCATCTACCTG 1393 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 |||||||||||| | ||| | | | ||| | || |||| |||||||||||||| || Sbjct 1392 GAGCCCTGGCACTCAGACCTCCTTGACTTCCTGGATTTGCGGAAGAACCACGGCAAGGAG 1333 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || || || || ||||||| || ||||||| | || ||||| || |||| ||| Sbjct 1332 GAGCACAGAGCGAGGGATCTCTTCTTCGGTCTCTGGATTCCTGACCTGTTCATGAGACGA 1273 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG-A 94373 || || | || | ||||| | | || || || || || || || ||||| | | Sbjct 1272 GTGAAGGAGGACGGAGACTGGACGTTGATGTGCCCGAACGAGTGCCCTGGGCTGTCTGAA 1213 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | | | || | |||| ||| ||||| | ||| | |||| || || Sbjct 1212 TGCTGGGGGGAGGAGTTTGAGAGA-AAGTATGAGGAATTCGAGAAGACAGGCAGGGGAAG 1154 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || | ||||||| | || |||| ||| | ||||| || Sbjct 1153 GAAGACCGTGAGGGCCCAGTGGCTGTGGTTCAAAATTCTGGAGAGCCAGATTGAGACCGG 1094 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 ||| |||||||| ||| ||| ||| | |||| ||||||||||| ||| |||| || Sbjct 1093 TACCCCCTACATGCTGTACAAAGACGCGTGCAACAGAAAGTCCAACCAACAGAACCT-GG 1035 Query 94554 GGTG-ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 |||| |||||| || || || ||||| || ||||||||||| || || || || ||| Sbjct 1034 GGTGCATCAAGTCATCCAACCTCTGCACTGAAATTGTCGAGTACACATCCCCTGATGAG 976 >seq15169 Length=4399 Score = 100 bits (110), Expect = 3e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 |||||||||||||| || || || |||||||| |||||||| ||||| || || ||| Sbjct 230 GCCCCCATGCCCACTGCATCGACCAGCCAGATCCTGGGCAACAATGAGTCCTTTGAGCCC 289 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACA 95221 |||||||||||| | ||| |||| || |||||| | || |||||| | | |||||| Sbjct 290 TTCACCTCCAACATCTACTACAGACGTGTGCTCTCTGGAGAATTCTTCTGCGTCAACA 347 >seq983 Length=6241 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 ||||| ||| || || ||||||| || ||| | || |||| ||||| || |||| Sbjct 226 GACTCGATCGAGGGCATCTTCGACACTCTGAAGCAGTGCGCGATGATCTCCAAGCACGCT 167 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 ||||| ||||| | || ||| || | | || || || |||||| | || ||| Sbjct 166 GGGGGCATCGGACTGGCGGTGCACAACATCAGAGCTCAGGACTCGTACATCAGGGGGACC 107 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || | || |||||||||||||| |||||| | ||||||||| Sbjct 106 AACGGAAGGTCAAACGGCCTCGTCCCCATGCTCAGAGTCTTCAAC 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493816063172400