Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10895 120 4e-22 seq34284 105 8e-18 >seq10895 Length=16309 Score = 120 bits (132), Expect = 4e-22 Identities = 694/1100 (63%), Gaps = 33/1100 (3%) Strand=Plus/Minus Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253 |||| | |||||||||| || ||| | | ||| ||| |||||| ||| || Sbjct 11582 TTCAATTCCTTGGCCTCATCACTGGTAAAGGGCAAACGCAACATAATAAAGGTATCTGCC 11523 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 || |||||||| || | || ||||| | ||| | |||||| || ||| || || Sbjct 11522 AGTCCTTGGACTCCCAAACCTATTGGCCTATGGCGCATATTGGAATTTTCCGCTTCCTTT 11463 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 ||||| || |||||||||| || |||||||| || || ||||| || ||||| | Sbjct 11462 ACGGGGTAGTAATTCCTATCAATGACCCTATTAAGGTTCTTGGTCACCCGTTTTGTAACC 11403 Query 116374 TCATGAAGCTTTTC--GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 116431 | |||| || | || |||||| ||| | ||| | ||| || | ||||| | Sbjct 11402 T--TGAACAATTCCTTGTGATCAAATTTGCC---CCCTTTA---ACAAACATGGGAAGAG 11351 Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 | || || |||| ||||| || | ||||| || || || | || || | Sbjct 11350 CTATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAGGTATATTCCAATATCTCGG 11291 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TTACAC 116550 |||| | ||| ||| || || ||||||||||| ||| ||| ||| | || | Sbjct 11290 TACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGA-TTGCTTTTACGATTGGCC 11232 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 |||||||| || |||||||| ||||| |||||||| | ||||| | | || | | Sbjct 11231 GCATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGGGATTCCAATATTTTTTCC 11172 Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC----CCTCCTCCTCGTACTTTGT 116666 |||| ||| ||| || || || || || |||| |||| || || Sbjct 11171 CATAAATCCCTGGCCTTTACCGT----TTTGCGACCCTTATCCTCTGCCTCATATTTCAA 11116 Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC---CCTGGTGCCTTATCTGG 116723 || || ||||| || |||| | | ||| | | ||||| | || || Sbjct 11115 ATATAGTTTTTCAAATTCCTCACTGTGA---TTTGAAAACAATCCTGGACATTCATTGGG 11059 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 || | | | ||| | || |||| || ||||||||||| | ||||| ||||| Sbjct 11058 GCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAACAAATCTGGAATCCA 10999 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 | || |||| ||||| || || |||||| | || || || ||| || Sbjct 10998 CATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGGTTCTTCTTCAATTC 10939 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 ||||||||| | |||||||| ||||| || || | || | || | || || || Sbjct 10938 CAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCAAAACTTCCTTTTCG 10879 Query 116904 ACGACCAGCC----TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | || ||| || | || || | ||||| | |||||||| | ||||| || | Sbjct 10878 -CTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACCCTTAGCATAGGGA 10820 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGT 117019 ||||||| || ||||| || || ||| || | || | |||| || Sbjct 10819 CAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCGTAGCCCGAACATTGT 10760 Query 117020 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGC 117079 | ||| | || || ||||| || | | ||||||| ||| || | | | || Sbjct 10759 GAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGGTCTGCTTCAAGGTGT 10700 Query 117080 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTG 117139 |||| || |||||||| ||| |||| | || | ||||||||| ||||| || | Sbjct 10699 CGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGCAGGAGGACATCTGCG 10640 Query 117140 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATA-CCTTGGGAC 117198 || | || || || | |||||||||||| ||||| || ||| |||| ||| || ||| Sbjct 10639 GCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGAA-ATATTTTTTTGAC 10581 Query 117199 ATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACC 117258 ||| || ||||| || | | ||||| || || | ||| || || | | || Sbjct 10580 ATCAGCTCATAGGTTTCTATGGCAGAGTCCATATCATTTAAGTGGATTCCAACCGCAACG 10521 Query 117259 CGCATAAACATGTATTGGGG 117278 ||||| ||||| | ||||| Sbjct 10520 CGCATCAACATATGCTGGGG 10501 >seq34284 Length=3714 Score = 105 bits (116), Expect = 8e-18 Identities = 106/137 (77%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 31010 ATGCCCAAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATT 31069 ||||| |||||| | ||||| ||||| ||||| |||||| | |||||||||||||| || Sbjct 2440 ATGCCGAAGAAAATTTGGTACGCGCCAAACAAGTTTGAAGCCTATGGGGAGGAAGAGATA 2381 Query 31070 AAAGCCGTTGAGGATTGCCTTCGCGATGGCTGGCTCGCTGGCTTTGGTGATCGCACTATG 31129 ||||| || ||| |||||||| ||||||||||| || | ||| ||| || | Sbjct 2380 AAAGCTGTGGAGTCCTGCCTTCGAGATGGCTGGCT---TGCCCCCGGTCCTCGAACGGCG 2324 Query 31130 GAGTTTGAGAAGAGGGT 31146 ||||||||| ||| ||| Sbjct 2323 GAGTTTGAGGAGAAGGT 2307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612382257860400