Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq9473 100 7e-16 seq56386 96.9 8e-15 >seq9473 Length=1265 Score = 100 bits (110), Expect = 7e-16 Identities = 121/164 (74%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || || |||||||||||||||||||| ||||||||||| || || ||| || || Sbjct 1255 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCC 1196 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| |||||| ||| ||| |||| | ||| | | || ||||| | ||| Sbjct 1195 TTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTG 1136 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||||||| || |||||||| ||||| || || || |||||| Sbjct 1135 ATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTG---CATTTT 1095 >seq56386 Length=466 Score = 96.9 bits (106), Expect = 8e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| || ||||| |||| ||||||||||| || || || ||||| Sbjct 354 AGCACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGCGTTCTCCCATCC 413 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 || |||||||| || || |||||||| |||||||| || || |||||| || Sbjct 414 TCAAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGGAATTCCCTC 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176705857378230