Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9473 102 9e-17 seq8271 89.7 6e-13 >seq9473 Length=1265 Score = 102 bits (112), Expect = 9e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| |||| ||||||||||| |||||||| |||| |||||||| |||| || Sbjct 1264 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGA 1205 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||||| |||||| ||||| || | | | ||| | |||||| Sbjct 1204 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACA 1145 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || | ||||| || || || || || || || || ||||| ||||||||| Sbjct 1144 TCGAGAGTGATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATTTTG 1094 >seq8271 Length=1924 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || ||||| | | | || |||||||||||||| || || | Sbjct 1240 CCTTCTGGATGTTGTAGTCAGAAAGAGTTCTCCCATCCTCGAGCTGCTTGCCCGCAAAGA 1299 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 | | ||||||||| |||| || | | |||||||||| |||||| ||||| Sbjct 1300 TAAGGCGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGA 1353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564201964738800