Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq56386 98.7 1e-15 seq37644 87.8 2e-12 >seq56386 Length=466 Score = 98.7 bits (108), Expect = 1e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38343 GAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 |||||||||||| | || || ||||| ||||| | || ||||| ||||| || || | | Sbjct 466 GAGGGAATTCCCCCTGATCAGCAGCGCCTCATCTTTGCAGGCAAGCAGCTTGAGGATGGG 407 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 | || || |||||||||||||| |||||| | || || ||| ||||||| || || Sbjct 406 AGAACGCTGTCTGACTACAACATCCAGAAGGAATCCACTCTCCATCTGGTGCTCCGCCTG 347 Query 38463 AGAGGCGGCCGC 38474 ||||||||| || Sbjct 346 AGAGGCGGCTGC 335 >seq37644 Length=6317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || | ||||||||| || || || || || |||| | || || || | | Sbjct 4331 AATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTC 4390 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | || || | ||||||||||| | |||||||| || | |||||| || | Sbjct 4391 CGACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGA-CCCCGCCTGATC 4449 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | || || | ||| ||||| || || || || | ||| || ||| |||||||| Sbjct 4450 AGCAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACA 4509 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | || | |||||| | || || | ||||| || || Sbjct 4510 ATATTGAGAAGGAATCCACCCTCCGCTTGGTTCTTCG 4546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499255670649600