Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq52741 123 1e-22 seq37644 122 3e-22 >seq52741 Length=4446 Score = 123 bits (136), Expect = 1e-22 Identities = 247/358 (69%), Gaps = 10/358 (3%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||| |||| | ||||| ||| || |||||| | || || || | ||| Sbjct 1811 CTCCCCAAGAGCTTTCTGCAATGGTCCTTCAAAAGATGAAAAAGACCGCGGAGGATTAT- 1753 Query 451302 TTGGTTCTCCA-GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAA 451360 |||| | | ||| | | || || ||||| || || || ||||| |||||||||||| Sbjct 1752 TTGGGACAGGACGTTTCAAAGGCCGTTATTACGGTACCGGCCTATTTTAATGATGCACAA 1693 Query 451361 CGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAAT 451420 || |||||||| || || ||||| | |||||||| | | || || ||||| ||| Sbjct 1692 CGCCAAGCAACCAAGGAGGCAGGGGAAATTGCTGGACTTACCGTAGAACGTATTATCAAT 1633 Query 451421 GAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaa 451480 ||||| || ||||| | | || ||||| || ||| || |||| | || || || Sbjct 1632 GAACCGACTGCAGCATCCTTGGCTTATGGGCT-GGATAA--AAAACATAC---CGATCAA 1579 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT-GA 451539 || | | || ||||| ||||| ||||| || ||||| ||| | ||| |||| | Sbjct 1578 AAGGTAGTGGTCTTTGACTTTGGAGGAGGTACGCATGACGTTTCCAT-CTTGGAATTGGG 1520 Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| |||||||| ||| ||| || |||| || || ||| | || ||||| ||| Sbjct 1519 CGATGGTGTATTTGAGGTATTGGCCACGGATGGGGACACCCATTTGGGTGGTGATGAT 1462 >seq37644 Length=6317 Score = 122 bits (134), Expect = 3e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||| ||| ||||| ||||| || || || | ||| | ||||||||| | || Sbjct 4331 AATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTC 4390 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || |||||||| | ||| ||||||||||||| || ||||| | || |||||||| Sbjct 4391 CGACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGACCCCGCCTGATCA 4450 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | | || ||| |||| || |||||||| ||||| ||||| | | || || || Sbjct 4451 GCAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACAA 4510 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 |||||| ||||| | || || | ||| || Sbjct 4511 TATTGAGAAGGAATCCACCCTCCGCTTGGT 4540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1972005105182520