Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq52741 100 2e-15 seq633 86.0 5e-11 >seq52741 Length=4446 Score = 100 bits (110), Expect = 2e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 518162 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221 || |||||||| || ||||| || || | || ||||| |||||||| ||||| | Sbjct 1589 TGTTTTTTATCCAGCCCATAAGCCAAGGATGCTGCAGTCGGTTCATTGATAATACGTTCT 1648 Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 518281 || |||| ||||||||| ||||| || || || ||||| | ||||| ||| |||||| Sbjct 1649 ACGGTAAGTCCAGCAATTTCCCCTGCCTCCTTGGTTGCTTGGCGTTGTGCATCATTAAAA 1708 Query 518282 TATGCAGGAACAGTAATAACGGC 518304 || || || || ||||||||||| Sbjct 1709 TAGGCCGGTACCGTAATAACGGC 1731 >seq633 Length=12488 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||| || |||| | |||||||||||||| || || ||||| | | ||| | Sbjct 5602 TTGTCAAGGCCGAACGCCAGCGCAGCAGCAGTTGGCTCGTTGATAATACGGAGAACCTCC 5661 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||||| | || ||||| || ||||| ||||| || || ||||| ||||| ||| Sbjct 5662 AAACCGGCAATTTTGCCAGCATCCTTGGTGGCCTGTCTCTGGGAGTCGTTGAAATAAGCA 5721 Query 518288 GG 518289 || Sbjct 5722 GG 5723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3773543159003140