Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10895 159 4e-34 seq83140 109 7e-19 seq34284 107 2e-18 >seq10895 Length=16309 Score = 159 bits (176), Expect = 4e-34 Identities = 1107/1758 (63%), Gaps = 80/1758 (5%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||||| ||||| || ||| | || ||||| | ||||| || |||| Sbjct 10501 CCCCAGCATATGTTGATGCGCGTTGCGGTTGGAATCCACTTAAATGATATGGACTCTGCC 10560 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTT 111730 | || || || || |||||| ||| |||| ||| |||||||| |||||||| Sbjct 10561 ATAGAAACCTATGAGCTGATGTCAAAAAAATAT-TTCACCCATGCAACACCTACCCTCTT 10619 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||| | || || || | || || |||||| || ||||| | || | ||||| || Sbjct 10620 CAACTCCGGAACGCCCAAGCCGCAGATGTCCTCCTGCTTCCTATTGGCCATGAAGGACGA 10679 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCC----AAATCTCAAAGTGGG 111846 ||| |||| ||||||| ||| || |||| | || ||||||| | | | Sbjct 10680 CAGTATCGATGGTATTTACGACAC-CT---TGAAGCAGACCGCGAAAATCTCCCAATCTG 10735 Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GG 111904 | || || ||||| | ||| || |||| | || | | || ||| ||| || Sbjct 10736 CGGGGGGAATCGGACTTTCCATTCACAATGTTCGGGCTACG--GGATCATATATAGCCGG 10793 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| |||||| || |||||||| | || ||||| | |||||||| | ||| || || Sbjct 10794 TACCAATGGTACTTCCAATGGTATTGTCCCTATGCTAAGGGTATTTAATGACACGGCACG 10853 Query 111965 CTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||| || | |||| || | || || ||| | | || | ||| | ||||| || Sbjct 10854 CTACGTTGATCAAGGAGGCGGGAAGCGAAAAGGAAGTTTTGCCATTTATGTAGAGCCTTG 10913 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| |||||||| | || || | || ||| ||||| || | || || ||| Sbjct 10914 GCATGCGGATATTTTTGACTTTTTGGAATTGAAGAAGAACCACGGAAAGGAAGAAATGCG 10973 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| ||||| |||| ||| | |||||||||||| | ||||||||| | || |||| Sbjct 10974 TGCCCGTGATCTGTTCTACGCCATGTGGATTCCAGATTTGTTCATGAAGCGCGTGGAGGC 11033 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA---CCCGG--TCTCTCCGATGCC 112196 | || ||||| | | | || || ||| | | || || | | | | | | Sbjct 11034 CAATGAAGATTGGACCTTAATGTGCCC---CAATGAATGTCCAGGATTGTTTTCAAATCA 11090 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | |||||| |||||| || || || || |||| ||| | || | | || Sbjct 11091 CAG--TGAGGAATTTGAAAAACTATATTTGAAATATGAGGCAGAGGATAAGG-GTC-GCA 11146 Query 112257 A--CGGT----GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310 | |||| ||||| ||| | ||| || || | | || || | ||||| Sbjct 11147 AAACGGTAAAGGCCAGG----GATTTATGGGAAAAAATATTGGAATCCCAGATTGAGACG 11202 Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 112370 || || || ||||||||||| || || || || | || || ||||| ||||| ||| Sbjct 11203 GGAACGCCCTATATGCTTTATAAGGATGCGGCCAATCGTAAAAGCAATCAGAAGAACTTG 11262 Query 112371 GGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 ||| ||| |||||| || ||||| || || ||||||| ||| | ||||| Sbjct 11263 GGTACTATCCGATCTTCCAATCTTTGTACCGAGATATTGGAATATACCTCCCCCGATGAA 11322 Query 112431 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 112490 || || |||||| | || || || ||||| |||| || ||| | | | ||| Sbjct 11323 GTAGCGGTTTGTAACTTGGCCTCTATAGCTCTTCCCATGTTTGTTAA--AGGGGGCAA-- 11378 Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 ||||||| | | || | | | ||||| ||| || || || ||||| || || Sbjct 11379 --ATTTGATCACAAGGAATTGTTCAAGGTTACAAAACGGGTGACCAAGAACCTTAATAGG 11436 Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 || |||||||| |||| |||||||| || || || || |||||| | || | Sbjct 11437 GTCATTGATAGGAATTACTACCCCGTAAAGGAAGCGGAAAATTCCAATATGCGCCATAGG 11496 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 112670 ||||| ||| | || |||||||| || || ||| || ||| | | || | ||| Sbjct 11497 CCAATAGGTTTGGGAGTCCAAGGACTGGCAGATACCTTTATTATGTTGCGTTTGCCCTTT 11556 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || || |||||| | || || ||||| || |||| | ||||| Sbjct 11557 ACCAGTGATGAGGCCAAGGAATTGAACCAAGAGATTTTTGAAACCTTGTACTATGCCGCG 11616 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || | |||| ||| | || || || | || ||||| |||| || Sbjct 11617 GTTACCGCTTCTATGGAGGAGGCCAAAGTAGAGGGAGCCTACTCTTCCTTTAAGGGCTCA 11676 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG-----AAGGTGAGACCAAG--CT 112843 ||| |||| ||||| ||||| | || | |||| ||| ||| ||| || Sbjct 11677 CCAATTTCAGAAGGGAAATTTCAACATAATCTTTGGGGTATCAAG----GACGAAGAACT 11732 Query 112844 T------CACTACGACTGGG---ACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 112894 | | | ||||||| | | |||| | ||| | | || ||| | || Sbjct 11733 TTCGGGCCGTTGGGACTGGGAAAAATTGCGCAAGCAGGTCATAA---AAAATGGTGTGCG 11789 Query 112895 TAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 112954 ||| || ||| | || || ||||| || || || || | ||||| |||| || || Sbjct 11790 CAACTCCCTGTTGGTCGCTCCCATGCCTACCGCGTCTACATCCCAAATACTGGGGAACAA 11849 Query 112955 TGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 113014 || || ||||| |||||||| | ||||| ||| ||||| | | || ||||| Sbjct 11850 CGAGTGTTTTGAGCCCTACACCTCCAACATTTATACCAGAAGGGTATTGTCCGGGGAGTT 11909 Query 113015 TGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGA 113074 | | | || || ||||||||| |||| || | | | | || | ||| || || Sbjct 11910 TATCGTAGTGAATAAGCATCTCTTGGAAGATTTGGTAAAACTCGGAATTTGG---AATGA 11966 Query 113075 TA---TGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCC 113131 | | || | || || || ||| |||||||| | |||| ||||| Sbjct 11967 AAACCTAAAACAGGAGTTGATGCGCGCCAATGGCTCCATTCAGCACATTGATATAATTCC 12026 Query 113132 AGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGA 113191 ||| |||||| | ||||| || |||||||| ||| ||||| ||| | ||||| Sbjct 12027 CGATAGTATTAAGGAATTGTATAAAACGGTTTGGGAGCTCAGTATGAAAGATATTATTGA 12086 Query 113192 CATG-GCCG-CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG 113249 ||| |||| ||| || || |||||||| || || ||| ||||| | || ||| Sbjct 12087 TATGAGCCGTCAG--CGAGGGTATTTCATTGACCAGAGCCAATCGTTGAATTTGTTTATG 12144 Query 113250 GAAAGT-CCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCT 113308 |||| | ||||| || ||||| | | |||||||| | || |||||| | ||| | Sbjct 12145 GAAAATGCCAACTAT-TCCAAATTGACCTCTATGCATTTTTATGCTTGGAAAAGCGGTTT 12203 Query 113309 CAAAACGGGGATGTATTA 113326 ||||| |||||||| || Sbjct 12204 AAAAACAGGGATGTACTA 12221 >seq83140 Length=1468 Score = 109 bits (120), Expect = 7e-19 Identities = 292/436 (67%), Gaps = 34/436 (8%) Strand=Plus/Minus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| || |||| |||| || ||||| |||||| | || || | || ||||| Sbjct 1419 CGCAAGGGCTCCTTCGCCATCTACCTGGAGCCCTGGCACTCAGACCTCCTTGACTTCCTG 1360 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCT 112105 || ||||| ||||| || | |||||| | | | || | |||||||||| || ||| Sbjct 1359 GATTTGCGGAAGAACCACGGCAAGGAGGAG-CACAGAGCGAGGGATCTCTTCTTCGGTCT 1301 Query 112106 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 112165 ||||||||| || || ||||||| |||| ||||| || | ||| | | | || Sbjct 1300 CTGGATTCCTGACCTGTTCATGAGACGAGTGAAGGAGGACGGAGACTGGACGTTGATGTG 1241 Query 112166 TCCAGACAAGGCACCCGGTCTCTCCG-ATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACA 112224 || || || || || || || | |||| | ||| |||||||||| | | Sbjct 1240 CCCGAACGAGTGCCCTGGGCTGTCTGAATGCTG-GGGGGAGGAGTTTG---------AGA 1191 Query 112225 CAAAGTACGAG--------GAAGAAAGTCGGGCGACTG-CGACGGTG-----CCAGCTGC 112270 |||||| ||| ||||| || | || || | ||| ||| |||| || Sbjct 1190 GAAAGTATGAGGAATTCGAGAAGACAGGCAGGGGAAGGAAGACCGTGAGGGCCCAG-TGG 1132 Query 112271 CGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTA 112330 | || || ||| ||||| || || | ||||| ||||| || || ||||| || Sbjct 1131 CTGTG-GTTCAAA---ATTCTGGAGAGCCAGATTGAGACCGGTACCCCCTACATGCTGTA 1076 Query 112331 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG-ATCAAGAGTTCCA 112389 ||||||||| || ||| |||| || ||| |||| |||| ||| |||||| |||| Sbjct 1075 CAAAGACGCGTGCAACAGAAAGTCCAACCAACAGAACCTGGG-GTGCATCAAGTCATCCA 1017 Query 112390 ACCTCTGTACAGAAAT 112405 ||||||| || ||||| Sbjct 1016 ACCTCTGCACTGAAAT 1001 >seq34284 Length=3714 Score = 107 bits (118), Expect = 2e-18 Identities = 134/183 (73%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 34530 ATGCCCCAGAAAGTTTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATT 34589 ||||| ||||| ||||||| ||||| ||||| |||||| | |||||||||||||| || Sbjct 2440 ATGCCGAAGAAAATTTGGTACGCGCCAAACAAGTTTGAAGCCTATGGGGAGGAAGAGATA 2381 Query 34590 AAAGCCGTTGAGGCTTGCCTTCGCGATGGCTGGCTCGCTGGTTTTGGTGATCGCACTGTG 34649 ||||| || ||| | |||||||| ||||||||||| || ||| ||| || | | Sbjct 2380 AAAGCTGTGGAGTCCTGCCTTCGAGATGGCTGGCT---TGCCCCCGGTCCTCGAACGGCG 2324 Query 34650 GAATTTGAGAAACGGGTTGCGGACATATTCGGGAAGAGACATGGACTCTTTGTAAACTCT 34709 || |||||| | |||| ||| | ||||| |||| | || | || || || ||| Sbjct 2323 GAGTTTGAGGAGAAGGTTTCGGCTTTCTTCGGAAAGAAGTACGGTGTGTTCGTCAATTCT 2264 Query 34710 GGA 34712 ||| Sbjct 2263 GGA 2261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619604191216800