Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10895 185 1e-41 seq34284 102 1e-16 seq650 91.5 2e-13 seq83140 87.8 2e-12 >seq10895 Length=16309 Score = 185 bits (204), Expect = 1e-41 Identities = 1105/1755 (63%), Gaps = 30/1755 (2%) Strand=Plus/Minus Query 109413 ATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTT 109472 ||| ||||| || ||||| | ||| ||||| || || | |||||| || | | ||| Sbjct 12222 ATAGTACATCCCTGTTTTTAAACCGCTTTTCCAAGCATAAAAATGCATAGAGGTCAATTT 12163 Query 109473 GGAA-AGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGAC 109531 |||| ||| | | | | ||||||||||| |||| ||| || ||| || ||||| | Sbjct 12162 GGAATAGT-TGGCATTTTCCATAAACAAATTCAACGATTGGCTCTGGTCAATGAAATACC 12104 Query 109532 CACGATCAGCCGC-CATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTAC 109590 | || | | | || ||| || || ||| || || | ||||| || || || ||| Sbjct 12103 CTCGCTGA-CGGCTCATATCAATAATATCTTTCATACTGAGCTCCCAAACCGTTTTATAC 12045 Query 109591 AAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACC 109650 || | ||| ||| ||||||||| | |||| ||||| |||||| || || | Sbjct 12044 AATTCCTTAATACTATCGGGAATTATATCAATGTGCTGAATGGAGCCATTGGCGCGCATC 11985 Query 109651 ATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGC 109710 | | || | | || ||| | |||| ||| | ||| || | |||||| Sbjct 11984 AACTCCTGTTTTAGGTTTTCATTCCAAATTCCGAGTTTTACCAAATCTTCCAAGAGATGC 11925 Query 109711 TTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAG 109770 || || || |||| ||| || || | | | | || | || ||||| | |||||| Sbjct 11924 TTATTCACTACGATAAACTCCCCGGACAATACCCTTCTGGTATAAATGTTGGAGGTGTAG 11865 Query 109771 GGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCC 109830 || || |||||||| ||||| || || ||||| | || || || || ||||||||||| Sbjct 11864 GGCTCAAAACACTCGTTGTTCCCCAGTATTTGGGATGTAGACGCGGTAGGCATGGGAGCG 11805 Query 109831 ATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCA 109890 | | || ||| || | ||| || | | ||| ||| |||| | ||||| || Sbjct 11804 ACCAACAGGGAGTTGCGCACACCATTTTTTATGACCTGCTTGCGCAATTTTTCCCAGTCC 11745 Query 109891 TAACGACCACTAAATT--TAGTC-TCACCATCCCACATATCTGGTTGAAGTACACCCTCA 109947 |||| || || || | ||| | | |||| | || |||||| | || || Sbjct 11744 CAACGGCCCGAAAGTTCTTCGTCCTTGATACCCCAAAGATTATGTTGAAATTTCCCTTCT 11685 Query 109948 GCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAA 110007 | | || || ||||| || ||| | ||||| || | |||| ||| ||| Sbjct 11684 GAAATTGGTGAGCCCTTAAAGGAAGAGTAGGCTCCCTCTACTTTGGCCTCCTCCATAGAA 11625 Query 110008 GCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCT 110067 || | || |||| |||| || |||||||| | |||| | ||| Sbjct 11624 GCGGTAACCGCGGCATAGTACAAGGTTTCAAAAATCTCTTGGTTCAATTCCTTGGCCTCA 11565 Query 110068 TCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGA 110127 |||| | ||||| | || | | |||||| ||| || || || || || || | | Sbjct 11564 TCACTGGTAAAGGGCAAACGCAACATAATAAAGGTATCTGCCAGTCCTTGGACTCCCAAA 11505 Query 110128 CCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGG 110187 || || || | ||| ||| || || | || | ||||||||| | || | Sbjct 11504 CCTATTGGCCTATGGCGCATATTGGAATTTTCCGCTTCCTTTACGGGGTAGTAATTCCTA 11445 Query 110188 TCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAA 110247 || ||||||| ||| || ||||| ||||| || || | | | || | || | Sbjct 11444 TCAATGACCCTATTAAGGTTCTTGGTCACCCGTTTTGTAACCTTGAACAATTCCTTGTGA 11385 Query 110248 TCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCAC 110307 || || || | | |||| | ||| | |||| ||||| ||||| || | || || Sbjct 11384 TCAAA----TTTGCCCCCTT--TAACAAACATGGGAAGAGCTATAGAGGCCAAGTTACAA 11331 Query 110308 ACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTA 110367 || | || || | ||| |||||||| || || ||||| | |||||| Sbjct 11330 ACCGCTACTTCATCGGGGGAGGTATATTCCAATATCTCGGTACAAAGATTGGAAGATCGG 11271 Query 110368 ATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTAT 110427 || |||||||||||||||||| ||| ||| ||||||||||| ||||| || Sbjct 11270 ATAGTACCCAAGTTCTTCTGATTGCTTTTACGATTGGCCGCATCCTTATAAAGCATATAG 11211 Query 110428 GGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACA 110487 || || || || || |||| || | | || | ||||| ||| ||| || Sbjct 11210 GGCGTTCCCGTCTCAATCTGGGATTCCAATATTTTTTCCCATAAATCCCTGGCCTTTACC 11151 Query 110488 GTTGCGTTAGCGAGACCT-TCCTC---CTCGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543 ||| | |||| | | ||||| ||| || || || | | |||||||||| Sbjct 11150 GTT----TTGCGACCCTTATCCTCTGCCTCATATTTCAAATATAGTTTTTCAAATTCCTC 11095 Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCAC 110602 | || | | | || | ||| | || | ||| || | | || ||||| | || Sbjct 11094 ACTGTG-ATTTGAAAACAATCCTGGACATTCATTGGGGCACATTAAGGTCCAATCTTCAT 11036 Query 110603 CCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGC 110662 |||| || | ||||||||||| || ||||||||||| || |||| || |||||| Sbjct 11035 TGGCCTCCACGCGCTTCATGAACAAATCTGGAATCCACATGGCGTAGAACAGATCACGGG 10976 Query 110663 AACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGT 110722 ||| ||||| | || ||||| | ||||||||||| | ||||||| | Sbjct 10975 CACGCATTTCTTCCTTTCCGTGGTTCTTCTTCAATTCCAAAAAGTCAAAAATATCCGCAT 10916 Query 110723 GCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGACCCGCC----TGGTTAACA 110778 |||| || || | ||| | || | ||| || || | |||||| || | ||| Sbjct 10915 GCCAAGGCTCTACATAAATGGCAAAACTTCCTTTTCG-CTTCCCGCCTCCTTGATCAACG 10857 Query 110779 TAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTT 110838 |||||||| ||| |||| || ||||| |||||||| | ||| |||| ||| |||||| Sbjct 10856 TAGCGTGCCGTGTCATTAAATACCCTTAGCATAGGGACAATACCATTGGAAGTACCATTG 10797 Query 110839 GTACC-CCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACC 110897 ||||| ||| | | || | || |||| | ||| || | || || || || Sbjct 10796 GTACCGGCTATATAT-GATCCCGTAGCCCGAACATTGTGAATGGAAAGTCCGATTCCCCC 10738 Query 110898 CGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATC 110957 ||| | | |||| || || | | || | ||||||||||| || || Sbjct 10737 CGCAGATTGGGAGATTTTCGCGGTCTGCTTCAAGGTGTCGTAAATACCATCGATACTGTC 10678 Query 110958 TGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAA 111017 |||| |||| | ||| ||||| || |||||||| || |||||||| | ||||| Sbjct 10677 GTCCTTCATGGCCAATAGGAAGCAGGAGGACATCTGCGGCTTGGGCGTTCCGGAGTTGAA 10618 Query 111018 GAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGC 111077 ||| |||||||| ||||| |||| || |||||| | || || || | || Sbjct 10617 GAGGGTAGGTGTTGCATGGGTGAAATATTTTTTTGACATCAGCTCATAGGTTTCTATGGC 10558 Query 111078 GGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGT 111137 ||| | ||| || ||| || |||| ||||| ||||| ||||||| || ||| Sbjct 10557 AGAGTCCATATCATTTAAGTGGATTCCAACCGCAACGCGCATCAACATATGCTGGGGCCG 10498 Query 111138 TTCGATTAGCTTTCC 111152 |||| || ||| || Sbjct 10497 TTCGGCTATCTTCCC 10483 >seq34284 Length=3714 Score = 102 bits (112), Expect = 1e-16 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 26896 ATGCCAAAGAAAGTCTGGTATGCACCCAACAAATTTGAGTCATATGGGGAGGAAGAGATT 26955 ||||| |||||| | ||||| || || ||||| ||||| | ||||||||||||||||| Sbjct 2440 ATGCCGAAGAAAATTTGGTACGCGCCAAACAAGTTTGAAGCCTATGGGGAGGAAGAGATA 2381 Query 26956 AAAGCCGTTGAGGCTTGCTTGCGCGATGGCTGGCTCGCTGGCTTTGGTGATCGTACTGTG 27015 ||||| || ||| | ||| | || ||||||||||| || | ||| ||| || | | Sbjct 2380 AAAGCTGTGGAGTCCTGCCTTCGAGATGGCTGGCT---TGCCCCCGGTCCTCGAACGGCG 2324 Query 27016 GAATTTGAAAAGAGGGTCGCTGACCTCTTCGGTAAGAAATTTGGACTATTTGTGAACTCT 27075 || ||||| ||| ||| | | ||||||| ||||| | || | || || || ||| Sbjct 2323 GAGTTTGAGGAGAAGGTTTCGGCTTTCTTCGGAAAGAAGTACGGTGTGTTCGTCAATTCT 2264 Query 27076 GG 27077 || Sbjct 2263 GG 2262 >seq650 Length=81780 Score = 91.5 bits (100), Expect = 2e-13 Identities = 271/407 (67%), Gaps = 16/407 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || |||||||| || ||||| || || || || || | || ||||| || ||| Sbjct 2873 CGGTCGAAACGGCCCGGGCGCAGCAGCGCCGGGTCGAGCACGTCCGGCCGGTTGGTGGCG 2814 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || || | | || || |||||| ||||| |||||||| || || | |||| Sbjct 2813 GCGATCAGGA---TGACACCTTCATTGGCCTCGAAGCCGTCCATCTCCACCAGCAACTGG 2757 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGG-GC--ATACCACCTGCCGAACGCTTCTTA 11676 |||| ||||| || || || || ||| | || | ||| | |||| || | Sbjct 2756 TTGAGGGTCTGCTCGCGTTCGTCATTGCCGCCGCCGAGACCGGC-GCCG--CGATGGCGG 2700 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC-TGTTC 11735 ||||| ||||| || || |||| ||| | || || || ||| | |||| || || Sbjct 2699 CCGACCGCGTCGATTTCGTCGACGAAGATAATGCAGGGAGCGTTCTT-CTTGCCCTGCTC 2641 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | ||||| || || | || || || || ||||||||||| ||||||| | | Sbjct 2640 GAACATGTCACGCACTCGGCTGGCGCCGACGCCGACGAACATCTCGACGAAGTCGGAACC 2581 Query 11796 AGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 || | |||| ||| ||||| || | ||||| |||||||| || || || || |||| Sbjct 2580 GGAGATGGTGAA-GAACGGAACGTTGGCTTCACCGGCGATGGCCCGGGCCAGCAGCGTCT 2522 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTG 11901 |||| ||||| || | || | |||||| ||| ||||||||| Sbjct 2521 TACCGGTACCCGGCGGGCCGACCAGAAGGCAGCCTTTCGGGATCTTG 2475 >seq83140 Length=1468 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 ||||||| | ||||| || ||||| || | ||| | || |||||| || | || | Sbjct 431 CATCCGCAAAGCCCTGCACGCCGAGGCCCACGGGCCTGTGTCGCATGTTGGACCTCCGTG 490 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | || |||||||| |||| | |||||| || | || || ||||||||||| || Sbjct 491 CTTCCTCCACGGGGTAGTAGTTTCTGTCGATCACTCTGTTAAGGTTCTTCGTCACCACCT 550 Query 110222 TCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGG 110281 |||| | | ||||| || ||| | |||||| | || |||||| || || || | | Sbjct 551 TCGTCACGTAGTGGAGCTTCTCGAAGTCGAACTTCTTTGTCTCCGCGTTCACGTACATCG 610 Query 110282 GGAGAGCAATAGACGCAAGATTGCACACAGAAGTCT 110317 | | ||| || || || || ||||| |||| |||| Sbjct 611 GCAAAGCGATGGAGGCCAGGTTGCAAACAGCGGTCT 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587896038882000