Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10895 176 5e-39 seq34284 116 4e-21 seq83140 91.5 2e-13 >seq10895 Length=16309 Score = 176 bits (194), Expect = 5e-39 Identities = 1118/1769 (63%), Gaps = 72/1769 (4%) Strand=Plus/Minus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 ||||| | || | |||||||||||| || || | || |||||| || || | |||| Sbjct 12236 GCCTTGGTTCTCAAATAGTACATCCCTGTTTTTAAACCGCTTTTCCAAGCATAAAAATGC 12177 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGG-ACTTTCCATGAAAAGATTCATACTTTGACTCTG 105699 ||||| | | ||||| || ||||| | ||||||| || | ||||| ||| ||||| Sbjct 12176 ATAGAGGTCAATTTGGA-ATAGTTGGCATTTTCCATAAACAAATTCAACGATTGGCTCTG 12118 Query 105700 GTCAATGAAGCGACCACGTTGTGCCGC-CATATCAATGACATCCTTCATCTTGATTTCCC 105758 ||||||||| || || || | || ||||||||| | ||| ||||| ||| |||| Sbjct 12117 GTCAATGAAATACCCTCGCTG-ACGGCTCATATCAATAATATCTTTCATACTGAGCTCCC 12059 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGA-TATCTGAGATATTTTGAATTGAA 105817 | || || || | | ||| ||| ||| || | ||| | | || | ||||| || Sbjct 12058 AAACCGTTTTATACAATTCCTTAATACTATCGGGAATTATATCA-ATGTGCTGAATGGAG 12000 Query 105818 CCCCCCGCCTTGACCATGAGATCCT-TCATATCCTTGGA--CCAAAGACCAATCTTCTTG 105874 || || | ||| | |||| | || || | ||||| || | || Sbjct 11999 CCATTGGC---GCGCATCAACTCCTGTTTTAGGTTTTCATTCCAAATTCCGAGTTTTACC 11943 Query 105875 AGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA 105934 | ||| | | ||||||||| || || | | |||||| || | | ||||| | Sbjct 11942 AAATCTTCCAAGAGATGCTTATTCACTACGATAAACTCCCCGGACAATACCCTTCTGGTA 11883 Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | |||||||| ||||| || || || || |||| ||||| | || || Sbjct 11882 TAAATGTTGGAGGTGTAGGGCTCAAAACACTCGTTGTTCCCCAGTATTTGGGATGTAGAC 11823 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | ||| || ||| || | ||| ||| || ||| | | Sbjct 11822 GCGGTAGGCATGGGAGCGACCAACAGGGAGTTGCGCACACCATTT---TTTATGACCTGC 11766 Query 106055 TTGAGAA---CATCCCAGTCGTAGTTG------AG--CTTGGTTTCACCTT-----CCCA 106098 ||| | | |||||||| | | || ||| || |||| |||| Sbjct 11765 TTGCGCAATTTTTCCCAGTCCCAACGGCCCGAAAGTTCTTCGT----CCTTGATACCCCA 11710 Query 106099 CATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACC 106158 | || | ||||| ||||| || | || || |||| ||| | |||| || Sbjct 11709 AAGATTATGTTGAAATTTCCCTTCTGAAATTGGTGAGCCCTTAAAGGAAGAGTAGGCTCC 11650 Query 106159 TTGGGCTTCAGCC-AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGA 106217 | ||| ||| | || || || | | || | |||| ||||||||| | Sbjct 11649 CTCTACTTTGGCCTCCTCCATAG-AAGCGGTAACCGCGGCATAGTACAAGGTTTCAAAAA 11591 Query 106218 TACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATA 106277 | |||| |||||||| ||||| ||| | | || ||| |||||| Sbjct 11590 TCTCTTGGTTCAATTCCTTGGCCTCATCACTGGTAAAGGGCAAACGCAACATAATAAAGG 11531 Query 106278 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 106337 ||| || || ||||| || |||||||| || || || || |||||||| || ||| || Sbjct 11530 TATCTGCCAGTCCTTGGACTCCCAAACCTATTGGCCTATGGCGCATATTGGAATTTTCCG 11471 Query 106338 CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 106397 | || ||||| || |||| || |||||||| | || || || ||||| || | Sbjct 11470 CTTCCTTTACGGGGTAGTAATTCCTATCAATGACCCTATTAAGGTTCTTGGTCACCCGTT 11411 Query 106398 TTGTGA-TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 106456 |||| | || | || || | | |||||| ||| | | || ||| || | Sbjct 11410 TTGTAACCTTGAACAA-TTCCTTGTGATCAAATTTGC------CCCCTTTAACAAACATG 11358 Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| || || || ||||| || ||||| || ||||| || || || || Sbjct 11357 GGAAGAGCTATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAGGTATATTCCAAT 11298 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || ||||| | |||||| || || ||||| ||||| || || || || Sbjct 11297 ATCTCGGTACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGATTGCTTTTACGA 11238 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||| ||||||||| || ||||| |||||||| |||||||| |||| || | | ||| Sbjct 11237 TTGGCCGCATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGGGATTCCAATATT 11178 Query 106637 GCCTTCCACACATCGGCGGCTGGTACAATGGCGTT----GGCCCGT-CCCTCCGCCTCGT 106691 | ||| | ||| ||| ||| |||| | ||| | |||| ||||| | Sbjct 11177 TTTTCCCATAAATCCCTGGCCTTTAC-----CGTTTTGCGACCCTTATCCTCTGCCTCAT 11123 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA--CCTGG---TGC 106746 | || || || |||||| |||||| | | | | | | | ||||| | | Sbjct 11122 ATTTCAAATATAGTTTTTCAAATTCCTCA--CTGTGATTTGAAAACAATCCTGGACATTC 11065 Query 106747 CTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTC 106806 ||| || || | | | ||| | || |||| || ||||||||||| | || Sbjct 11064 ATTG---GGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAACAAATC 11008 Query 106807 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 106866 ||||||||||| || | || ||||| | || ||||| | || ||||| Sbjct 11007 TGGAATCCACATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGGTT-CT 10949 Query 106867 TCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925 || | || || | || || | |||||||| ||||| ||||| | ||| | || | | Sbjct 10948 TCTTCAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCAAAAC 10889 Query 106926 ATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 106982 ||| ||||| | || |||||| || ||||| || ||| | |||||||| | | Sbjct 10888 TTCCTTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACCCTTA 10829 Query 106983 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 107042 |||| || | |||||||| || |||||| || || ||| ||| | || | Sbjct 10828 GCATAGGGACAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCGTAGCCC 10769 Query 107043 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 107102 |||| || ||| | || || ||||| || | | ||||||| ||| || | Sbjct 10768 GAACATTGTGAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGGTCTGCT 10709 Query 107103 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 107162 | | || | || ||||| | ||| ||| ||||| |||| | |||||||| || Sbjct 10708 TCAAGGTGTCGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGCAGGAGG 10649 Query 107163 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA- 107221 |||||||||| | || || || | ||||||||||| |||||||| || |||| ||| Sbjct 10648 ACATCTGCGGCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGAA-ATAT 10590 Query 107222 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 107281 || |||||| || || || || | | |||| || || || | |||||| || Sbjct 10589 TTTTTTGACATCAGCTCATAGGTTTCTATGGCAGAGTCCATATCATTTAAGTGGATTCCA 10530 Query 107282 ATGGCCACACGCATAAACATGTATTGGGG 107310 | || || ||||| ||||| | ||||| Sbjct 10529 ACCGCAACGCGCATCAACATATGCTGGGG 10501 >seq34284 Length=3714 Score = 116 bits (128), Expect = 4e-21 Identities = 106/133 (80%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 23994 ATGCCCAAGAAAGTTTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATT 24053 ||||| |||||| ||||||| ||||| ||||| |||||| | |||||||||||||| || Sbjct 2440 ATGCCGAAGAAAATTTGGTACGCGCCAAACAAGTTTGAAGCCTATGGGGAGGAAGAGATA 2381 Query 24054 AAAGCCGTTGAGGCTTGCCTTCGCGATGGCTGGCTCGCTGGCTTTGGTGATCGCACTGTG 24113 ||||| || ||| | |||||||| ||||||||||| || | ||| ||| || | | Sbjct 2380 AAAGCTGTGGAGTCCTGCCTTCGAGATGGCTGGCT---TGCCCCCGGTCCTCGAACGGCG 2324 Query 24114 GAGTTTGAGAAGA 24126 ||||||||| ||| Sbjct 2323 GAGTTTGAGGAGA 2311 >seq83140 Length=1468 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 ||||||||| | |||||| || || | |||||| ||| || ||||| |||| ||| Sbjct 988 TGTGTACTCGACAATTTCAGTGCAGAGGTTGGATGACTTGATGCACCCCAGGTTCTGTTG 1047 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| |||| |||||||||| || ||||| ||||||||||| || || ||||| |||| Sbjct 1048 GTTGGACTTTCTGTTGCACGCGTCTTTGTACAGCATGTAGGGGGTACCGGTCTCAATCTG 1107 Query 106624 TGACTTGAGAATT 106636 || |||||| Sbjct 1108 GCTCTCCAGAATT 1120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588898996455600