Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq13327 450 2e-121 seq303 334 8e-87 >seq13327 Length=3816 Score = 450 bits (498), Expect = 2e-121 Identities = 636/890 (71%), Gaps = 4/890 (0%) Strand=Plus/Minus Query 163875 TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCT 163934 |||||||| | || || || || || || || || || || ||||| |||||||| || Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 163935 GTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCC 163994 ||| |||| || || | || || || || || ||||| || || || || || || Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 163995 AATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTT 164054 ||||| |||||| | || || || | | || || || | |||| ||||| | Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 164055 TACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGG--TATCTATGCAT 164112 || ||||| || |||| |||| | || || | || ||| | ||||| || | || ||| Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGC-AT-CAT 2498 Query 164113 ACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTG 164172 | | ||||||||||| ||| | ||||||| | || ||||||||||| |||| || | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 164173 CTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAG 164232 ||| ||||||||| |||||||||||||| || || || || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 164233 GTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGT 164292 | || || || || | |||||| || || || ||||| || ||||||| |||| | || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 164293 TCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTAT 164352 |||| |||||||| || ||| | |||||||| ||||| ||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 164353 TTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTG 164412 |||| || ||| | || ||||| ||||| || ||| | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 164413 AAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACAT 164472 || | ||| ||| || | || ||||| || || || || || ||| | ||||||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 164473 ACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCA 164532 | || || || ||||| ||||| ||||| || ||||| ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 164533 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCA 164592 | ||||| ||||| || |||||||||||||| || || || ||||| ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 164593 CCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCA 164652 | ||| | || || || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 164653 TCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTC 164712 |||| |||| | || ||||| | | ||| || || | | || || || || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 164713 TGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGAT 164762 | || |||||||| ||||| ||||||||||| ||||| |||||||| ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 334 bits (370), Expect = 8e-87 Identities = 665/977 (68%), Gaps = 12/977 (1%) Strand=Plus/Minus Query 165236 TTTGTTGGTTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 165295 |||||||| || || ||| | | |||||||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 165296 CTTACTGGGACTACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTG 165355 || || |||||||||| || ||||||||| |||| || | ||| | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 165356 GAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCT 165415 || ||| || ||| | ||||| || || || || || || | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 165416 CTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGG 165475 ||| | | | || ||||| || ||||| || ||| | ||| ||| |||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 165476 GGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTTC-G 165534 || | || |||| | || | || ||| | || | | || || || || | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAG 27370 Query 165535 TCAGTTTGAATTAGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGG 165594 || |||||| | ||| | | | | ||||| || ||||| ||||| ||| | || Sbjct 27369 ACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGG 27310 Query 165595 TCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTT 165654 ||| || || |||||||| |||||| | || || ||| | |||||| ||||||| || Sbjct 27309 TCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATT 27250 Query 165655 TTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATT 165714 ||| || ||| ||| || || || || || || || || | || ||| | ||||| || Sbjct 27249 TTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTT 27190 Query 165715 CCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTGC 165774 |||||||| || ||||||| || |||||||||||||| |||||||| | || ||||| Sbjct 27189 TCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGC 27130 Query 165775 ATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATG--GTGAC 165832 || | |||||||||||||| | || ||| | ||||| | ||| |||||| ||| | Sbjct 27129 GTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTC 27070 Query 165833 G-ATGCAAATACTTTCAAGGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGT 165891 | ||| | || || || ||| | | || ||| ||||| || || |||||||| Sbjct 27069 GTATG---ACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGT 27013 Query 165892 TACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTT 165951 || ||||| ||||| || |||||||| || || | || ||| ||| ||| | ||||| Sbjct 27012 AACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTT 26953 Query 165952 GCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTAT 166011 |||||||||||| | || || || || | || | || || | | | || || | Sbjct 26952 ACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGT 26893 Query 166012 TGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGA 166071 |||||| || | || | | || || || ||||| || |||||| | ||||||| || Sbjct 26892 TGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGA 26833 Query 166072 AGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGC 166131 ||| || || || ||||| || || || ||||| || | | |||||||| | ||||| Sbjct 26832 AGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGC 26773 Query 166132 TTGGTTGGC--ACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTG 166189 ||| |||| ||| || ||||| ||||| || || | ||||| || |||||| | Sbjct 26772 TTGAATGGCTATGCAG--GACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTA 26715 Query 166190 CCTAGGGGTAACGCGCT 166206 ||| | || || || || Sbjct 26714 CCTCGCGGAAATGCTCT 26698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555903608763600