Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq13327 473 1e-128 >seq13327 Length=3816 Score = 473 bits (524), Expect = 1e-128 Identities = 675/950 (71%), Gaps = 0/950 (0%) Strand=Plus/Minus Query 168524 CTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACAGCAGCAGCATGT 168583 || ||| | || ||||| || | |||||| | ||| |||||| ||||| | | ||| Sbjct 2792 CTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGTATCGTGT 2733 Query 168584 TTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTA 168643 ||||||| ||| ||| | || ||||| || || ||||| || ||||| | || || || Sbjct 2732 TTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCAGTT 2673 Query 168644 GCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAAC 168703 |||| |||| | || ||||| || || |||||||| || || || || |||||| Sbjct 2672 TCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCAAAT 2613 Query 168704 GCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATAT 168763 || || ||| | || || || | | || || || || || || || || ||| Sbjct 2612 GCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTGTAT 2553 Query 168764 AATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATG 168823 || || || |||||||| || || | | || ||| ||||||| | | | || | Sbjct 2552 AACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATATCTT 2493 Query 168824 GGTAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTAT 168883 ||| | |||| |||||| ||| | |||| ||| | ||||| || | || |||| Sbjct 2492 GGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCTTTC 2433 Query 168884 TCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCT 168943 || |||||||| | ||||||| || ||||| || || |||||| | || || || ||| Sbjct 2432 TCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGATCT 2373 Query 168944 TTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAA 169003 || || ||||| |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2372 TTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTCCAG 2313 Query 169004 GCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGT 169063 |||||||| || || | ||||| || ||||| ||||| ||||| ||||| | || || Sbjct 2312 GCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTTGGA 2253 Query 169064 GGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACT 169123 |||||| |||| || |||||||| || | || ||||| || |||| |||| Sbjct 2252 GGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATGACT 2193 Query 169124 ACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAAT 169183 | ||| || ||||| | || ||||| || || ||||| || ||| | ||||| |||||| Sbjct 2192 AGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATATAAT 2133 Query 169184 ATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAAC 169243 || || || || || ||||||||||| | ||||||| || | |||||||| || ||| Sbjct 2132 ATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAATAAC 2073 Query 169244 TCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCT 169303 ||| | | | ||||||||||| ||| | | || || || | | || ||||| | Sbjct 2072 TCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACAGCA 2013 Query 169304 ATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTA 169363 ||||| || |||| ||||| ||||| | || ||||| || || ||||||||| | | Sbjct 2012 ATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATCATT 1953 Query 169364 GATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGT 169423 |||| | || | ||| | | || | || | | || | ||||| || || Sbjct 1952 GATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTAGGA 1893 Query 169424 ATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct 1892 ATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563406625771200