Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq303 417 9e-112 seq13327 416 3e-111 seq11659 93.3 5e-14 >seq303 Length=42796 Score = 417 bits (462), Expect = 9e-112 Identities = 695/996 (70%), Gaps = 10/996 (1%) Strand=Plus/Minus Query 163661 TATTTATTGGTTGGTCTGGATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCT 163720 ||||| |||| || || |||||| | ||| |||| || |||||| |||| | || || | Sbjct 27670 TATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGAT 27611 Query 163721 GGCTTACTGGTACAACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATC 163780 | || ||||| |||||||| || ||||| | ||||| || ||| || ||||| Sbjct 27610 GATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATC 27551 Query 163781 TTGAGGGTGCTAATTTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATT 163840 | || ||| ||||||| | || || ||||| || ||||| ||| | ||||| || | Sbjct 27550 TAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACT 27491 Query 163841 CTCTTCTTCTTCTCTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTG 163900 | ||| | | | || ||||| || |||||||| ||| || ||| ||| ||| Sbjct 27490 CGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTG 27431 Query 163901 GGGGACTCTGGAATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTC 163960 | || | || |||||| | || | || || |||| | | || || || || Sbjct 27430 GAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTA 27372 Query 163961 GG-CAATTTGAACTTGCTCGCCTGATTGGAA-TCAGACCCTACAATGCGATTGCTTTCTC 164018 | ||||||||| |||| | | | || | | | || || ||||| ||||||||| | Sbjct 27371 AGACAATTTGAAATTGCAAGGTT-AGTGCAGGTTCGTCCATATAATGCAATTGCTTTCAC 27313 Query 164019 TGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTG 164078 ||||| ||||| || || || ||||||| | || || ||| | |||||| | ||||| Sbjct 27312 CGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTG 27253 Query 164079 GTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGG 164138 || || || ||| |||||||||||| || || || ||||| | ||||| ||||||| Sbjct 27252 ATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGG 27193 Query 164139 ATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGG 164198 ||||||||||| || |||| || |||||||||||||| || || ||||| |||| || Sbjct 27192 GTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGG 27133 Query 164199 AGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGA 164258 || || | ||||| || || |||| || || ||||||| || ||| ||||||| | Sbjct 27132 TGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGT 27073 Query 164259 ACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 164318 |||||||| || ||| | || || ||||||||||||||| ||||| Sbjct 27072 GTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGT 27013 Query 164319 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCT 164378 || ||||| || || || || ||||| || || || || |||||||||||||| ||| | Sbjct 27012 AACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTT 26953 Query 164379 TCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTAT 164438 ||||| || ||||| || || || || | || |||| || || || |||| || | Sbjct 26952 ACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGT 26893 Query 164439 TGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGA 164498 ||| || || | ||| | | || ||||||||||| ||||||| | ||||||| || Sbjct 26892 TGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGA 26833 Query 164499 AGATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGC 164558 ||||||||| ||||| || || |||||||| || || || | || |||||| ||||||| Sbjct 26832 AGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGC 26773 Query 164559 ATGGTTAGC--ACCAGTTGACCAGCCAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTG 164616 || | || ||| ||||| || ||| || | |||||||| ||||| | Sbjct 26772 TTGAATGGCTATGCAG--GACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTA 26715 Query 164617 CCGAGAGGTAATGCGCTTTAATAAGGATTCTCGTTA 164652 || | || ||||| || ||| || ||| ||| || Sbjct 26714 CCTCGCGGAAATGCTCTCTAACAA--ATTTTCGATA 26681 >seq13327 Length=3816 Score = 416 bits (460), Expect = 3e-111 Identities = 663/949 (70%), Gaps = 2/949 (0%) Strand=Plus/Minus Query 162414 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCAT 162473 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-AT 2738 Query 162474 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAAC 162532 | |||||||| | || || || || || || || || || || || || || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 162533 CCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTT 162592 | || | || || || | || || || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 162593 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 162652 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 162653 TGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGCCT 162712 |||||||||| || |||| |||| |||| ||| | || ||| | ||||| | | | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 162713 ACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGCGTAG 162772 | | || ||||| || ||| | ||||||| | || |||||||| || || | ||||| Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 162773 CATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCAAG 162832 | | ||||||||| ||||||||||||||||| || || || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 162833 GTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGTCT 162892 | ||||| || || | |||||| | || || ||| |||||||||| |||||| || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 162893 TCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTCT 162952 |||| |||||||| || || | ||||| || ||||||||| || || ||||| || | Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 162953 TCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTG 163012 | || || || | || ||||| ||||| || ||||| |||||||| | | | | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 163013 AGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACAT 163072 ||| | |||| ||| |||| || ||||| || || ||||| || ||| | || |||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 163073 ACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCA 163132 | || ||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 163133 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCA 163192 | ||||| ||||| || |||||||||||||| || || || || || ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 163193 CCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCA 163252 | || | || | || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 163253 TCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTT 163312 || |||||| | || ||||| | | || || || | | || |||||| | Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 163313 TGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGA 163361 | || |||||||| ||||| ||||| || || ||||| ||||| || || Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq11659 Length=22639 Score = 93.3 bits (102), Expect = 5e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 158988 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 159047 ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| |||||| Sbjct 16981 GTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGGTTCGAATCCTGT 17040 Query 159048 C 159048 | Sbjct 17041 C 17041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556561600038000