Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq13327 379 3e-100 >seq13327 Length=3816 Score = 379 bits (420), Expect = 3e-100 Identities = 620/893 (69%), Gaps = 0/893 (0%) Strand=Plus/Minus Query 215384 TGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCA 215443 |||||||| | || || | || ||||| || || ||||| || ||||| | |||||| Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 215444 GTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCA 215503 ||| | || ||| | | || || || || || ||||| || || || ||||| |||||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 215504 AACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTC 215563 || || || || | || || || | | || || || |||| ||||| | Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 215564 TACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATAC 215623 || || || ||||||| |||| | ||| | | || ||| | || || | | |||| Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 215624 TGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCT 215683 || | |||| ||| | |||| | ||||| ||| | ||||| || | || ||| Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 215684 TACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGT 215743 | ||| ||||| || | || || | || ||||| || || || ||| |||| || || Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 215744 TCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTC 215803 ||||| || |||| ||||| || ||||| |||||||||||||||| |||| | || ||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 215804 CAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTC 215863 ||||| ||||| || || | |||||||| ||||||||| || ||||| || || || Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 215864 GGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAG 215923 || || || || || ||| ||||| || || | |||||||| || |||| | Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG 2196 Query 215924 ACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATAC 215983 || | ||| | ||||| | || || || || || |||||||| || | |||||||| Sbjct 2195 ACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATAT 2136 Query 215984 AACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAAC 216043 || |||||||| || ||||| ||||| || || || ||||| |||| |||| ||| || Sbjct 2135 AATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAAT 2076 Query 216044 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACT 216103 |||||| | | | ||||||||||||||| | || || || | ||||| ||| Sbjct 2075 AACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACA 2016 Query 216104 GCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 216163 |||||||| | |||||||| ||||| || || || ||||| |||||||| || || Sbjct 2015 GCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATC 1956 Query 216164 GTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTT 216223 | || ||| || || ||| | | ||| || || | | || | ||| || Sbjct 1955 ATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTA 1896 Query 216224 GGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGC 216276 || |||||||||||||| ||||||||||| ||||| ||||| |||| || || Sbjct 1895 GGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743715399751200