Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq13327 482 3e-131 seq303 412 4e-110 >seq13327 Length=3816 Score = 482 bits (534), Expect = 3e-131 Identities = 678/949 (71%), Gaps = 2/949 (0%) Strand=Plus/Minus Query 181824 CGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACCATC 181883 ||||| ||| |||| |||||||| | | ||| | ||||| | || ||| ||| Sbjct 2795 CGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-ATC 2737 Query 181884 -TGTTTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAACC 181942 |||||||| | |||||| ||||| ||||| || || ||||| || || || || || || Sbjct 2736 GTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCC 2677 Query 181943 CGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTC 182002 || | || || || | || || || || || ||||| || || || || || || Sbjct 2676 AGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTC 2617 Query 182003 CAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCT 182062 || || |||||| | || || || | | || || || | |||| || || | Sbjct 2616 AAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATT 2557 Query 182063 GTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCTA 182122 ||||||||| || |||| |||| | ||||| | || ||| | ||||| | | || Sbjct 2556 GTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATA 2497 Query 182123 CATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGC 182182 | || |||||||| ||| | |||||| ||||| |||||||| || || | ||||| Sbjct 2496 TCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGC 2437 Query 182183 ATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGG 182242 | |||||| ||||| || |||||||| |||||||| |||| || || |||| ||||| Sbjct 2436 TTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGG 2377 Query 182243 TTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTT 182302 || || || |||| |||||| || ||||| || ||||||||||||| ||| | || || Sbjct 2376 ATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATT 2317 Query 182303 CCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATT 182362 ||| || ||||| || || | ||||| || ||||||||| || || ||||| ||||| Sbjct 2316 CCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATT 2257 Query 182363 CGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGA 182422 || || || | |||||||| ||||| || ||||| |||||||| | | | | Sbjct 2256 TGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTAT 2197 Query 182423 GACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTA 182482 ||| | ||| | || |||| || ||||| || || ||||| || ||| | || || || Sbjct 2196 GACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATA 2137 Query 182483 TAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAA 182542 ||| ||||| || || || || |||||||| ||| | ||||| |||| |||| || || Sbjct 2136 TAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAA 2077 Query 182543 CAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCAC 182602 ||||| ||||| || |||||||||||||| || || || ||||||||||| || || Sbjct 2076 TAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAAC 2017 Query 182603 CGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCAT 182662 ||| | || | || ||||| ||||| || || || ||||| |||||||| || || Sbjct 2016 AGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAAT 1957 Query 182663 CCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCT 182722 | |||||| | || ||||| || | ||| || ||| | || || ||||| ||| Sbjct 1956 CATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCT 1897 Query 182723 TGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGAT 182771 || |||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct 1896 AGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 412 bits (456), Expect = 4e-110 Identities = 682/980 (70%), Gaps = 6/980 (1%) Strand=Plus/Minus Query 183217 TTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGC 183276 ||| | ||||| ||||| || ||| | | ||| |||| || |||||| | || | || Sbjct 27674 TTTATATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGA 27615 Query 183277 GGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCC 183336 || || || || || |||| || || ||||||||| | ||||| || || ||| | Sbjct 27614 GGATGATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGC 27555 Query 183337 TATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGT 183396 ||||| |||||| ||| ||| | || || ||||| || ||||| ||| | ||||| Sbjct 27554 TATCTAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGG 27495 Query 183397 CATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAAGGGGACTTTCAACGC--TGGTGCC 183454 || || ||| | |||| ||| ||||| || |||| |||||||| ||| | |||| | Sbjct 27494 CACTCGCTTTTATTACCTTGAGGTCCCGAAGCTCA--GGGACTTTTAACTCGATGGTATC 27437 Query 183455 AACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCA 183514 || |||| || | || |||||| | || | || || |||| | | || || Sbjct 27436 AAGTTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT- 27378 Query 183515 TGCTTC-GACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCG 183573 || || |||| |||||| |||| | || | | ||||| || ||||| ||||| Sbjct 27377 TGTTTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCT 27318 Query 183574 TTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCT 183633 ||| | ||||| ||||| |||||||| ||| || | || ||||| | ||||| | Sbjct 27317 TTCACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCG 27258 Query 183634 TCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTT 183693 || || |||||||| ||||| || || || || || |||||||| || | ||| || Sbjct 27257 AGTTGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTT 27198 Query 183694 CAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTA 183753 || || || || ||||| || | || || |||||||||||||| || || ||||| || Sbjct 27197 CAAGGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTA 27138 Query 183754 GGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGAT 183813 ||||| || || | ||| |||||||| | || ||| | ||||| || ||| ||||| Sbjct 27137 GGAGGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGAT 27078 Query 183814 GGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCT 183873 || | |||| || || ||| | || ||| ||||||||| ||||| Sbjct 27077 GGTGTGTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCA 27018 Query 183874 ATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGT 183933 ||||| || || |||||||| || || || || || || || || ||| || |||||| Sbjct 27017 ATGGTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGT 26958 Query 183934 TGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGC 183993 ||||| || ||||||||||| || || || || | || | || ||| || |||| Sbjct 26957 TGGTTACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGG 26898 Query 183994 ATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCA 184053 || |||| || || | ||| | | || || |||||||| ||||||| | ||||| Sbjct 26897 ATGGTTGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCA 26838 Query 184054 GCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTA 184113 || |||||||| ||||| || ||||| || || || || ||| | |||||||||||| | Sbjct 26837 GCCGAAGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATC 26778 Query 184114 CGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTA 184173 ||||| || | || || ||||| ||||| ||||| || || |||||||| || Sbjct 26777 CGTGCTTGAATGGCTATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTT 26718 Query 184174 TTACCTAGAGGCAATGCTCT 184193 |||||| | || |||||||| Sbjct 26717 TTACCTCGCGGAAATGCTCT 26698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610574378922000