Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq13327 410 1e-109 seq303 372 3e-98 >seq13327 Length=3816 Score = 410 bits (454), Expect = 1e-109 Identities = 629/892 (71%), Gaps = 10/892 (1%) Strand=Plus/Minus Query 164854 TGTTTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGAACCT 164913 ||||| ||| |||| || | || || || || || || |||||||| |||||||| || Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 164914 GTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCT 164973 || |||| ||||| | ||||| || || || ||||| || || || || ||| ||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 164974 AACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATGGTTG 165033 || || || || | || || ||| | | || || || || || ||||| ||| Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 165034 TACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGCTAC 165093 || ||||| || |||||||| || ||||| | || ||| | ||||| ||||| | || Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 165094 ATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCA 165153 | ||||||||||| ||| | |||||| | || ||||||||||| |||| |||||| Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 165154 TATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGG 165213 | ||||| || || || || | || || || || || || || |||| ||||| Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 165214 AGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTC 165273 ||| || ||||| |||||||| || || ||||| || || |||| ||| | || ||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 165274 CAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTC 165333 || ||||| ||||| || | ||||| || ||||||||| || || || || ||||| Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 165334 GGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAG 165393 || |||||| | || ||||||||||||| | | ||||| || | | | | Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG 2196 Query 165394 ACAACTGAAACAGA-GAGTCA--GAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACC 165450 || | ||| ||| || ||| || || || ||||| || ||||| ||| | || || Sbjct 2195 ACTAGTGA---AGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACA 2139 Query 165451 TATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTC 165510 ||||| ||||| || || ||||| |||||||| ||||| || || |||| |||| || Sbjct 2138 TATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTT 2079 Query 165511 AACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTC 165570 || || || ||||| | ||||||||||| ||| || || |||||||| ||||| || Sbjct 2078 AATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTA 2019 Query 165571 ACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCT 165630 || || | || |||| || ||||| ||||| || || || ||||| |||||||| || Sbjct 2018 ACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCA 1959 Query 165631 ATTGTTGATAGTCAGAACAA--AATCATCCCTACTTGGGCTGACGTTCTGAACCGTGCTG 165688 || ||||| ||||| | | || | | ||| || || | | || ||||| Sbjct 1958 ATCATTGAT--GCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAA 1901 Query 165689 GTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGA 165740 ||| || |||||||| ||||||||||||||||| ||||| ||||| || || Sbjct 1900 ATCTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 372 bits (412), Expect = 3e-98 Identities = 672/978 (69%), Gaps = 6/978 (1%) Strand=Plus/Minus Query 166203 TTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 166262 |||||||| || || ||| | | ||| |||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 166263 CTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTG 166322 | || ||||||||||| || ||||||||| ||||||| || ||| || ||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 166323 GAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCT 166382 || ||| || ||| | ||||| || || || || || || || ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 166383 CTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGA 166442 || | | | || ||||| || ||||| || ||| | |||| ||| ||||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 166443 GGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGG 166502 || | || ||| | || | || || | || | | || || || || | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAG 27370 Query 166503 -CAGTTTGAAATCGCTCGTCTAGT--AGGTATTCGTCCGTACAATGCAATCGCTTTTTCT 166559 || |||||||| || | |||| |||| |||||| || |||||||| ||||| | Sbjct 27369 ACAATTTGAAATTGCAAGGTTAGTGCAGGT--TCGTCCATATAATGCAATTGCTTTCACC 27312 Query 166560 GGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGG 166619 ||||| ||||| || || || ||||||| | || || ||| | |||||| ||||||| Sbjct 27311 GGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGA 27252 Query 166620 TTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGA 166679 ||||| || ||| ||| || || | || || || |||| | || ||| ||||||| Sbjct 27251 TTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGG 27192 Query 166680 TTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGT 166739 || || ||||| |||||||| || || |||||||||||||| ||||||||| | || ||| Sbjct 27191 TTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGT 27132 Query 166740 GCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAA 166799 || || | |||||||||||||| | || ||| | || || | ||| ||||||||| Sbjct 27131 GCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTG 27072 Query 166800 CAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTT 166859 | | || || || || | | || ||| ||||| || ||||||||||| Sbjct 27071 TCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTA 27012 Query 166860 ACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTG 166919 || ||||| || | ||| |||||||| || || | || ||| ||| ||| | ||||| Sbjct 27011 ACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTA 26952 Query 166920 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATT 166979 |||||||||||| | || || || || | || | || || | | | || || || Sbjct 26951 CATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTT 26892 Query 166980 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAG 167039 ||||| || | || | | || || || ||||| || ||||| || | ||||| || Sbjct 26891 GGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAA 26832 Query 167040 GATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCT 167099 |||||||| || ||||| || |||||||| || || | | ||||| || || ||| || Sbjct 26831 GATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCT 26772 Query 167100 TGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCT 167159 || ||||| | || ||||||||||| | |||| | ||||| || || ||| | ||| Sbjct 26771 TGAATGGCTATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCT 26712 Query 167160 AGAGGTAACGCTCTCTAA 167177 | || || ||||||||| Sbjct 26711 CGCGGAAATGCTCTCTAA 26694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562627257465600