Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq13327 446 2e-120 >seq13327 Length=3816 Score = 446 bits (494), Expect = 2e-120 Identities = 667/947 (70%), Gaps = 0/947 (0%) Strand=Plus/Minus Query 169726 TATGTTGGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTT 169785 ||| | || ||||| || | || ||| | ||| ||||| ||||| | | || || Sbjct 2789 TATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGTATCGTGTTTC 2730 Query 169786 ATCGTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCA 169845 || | |||||| | || || || || || || || |||||||| | || || || || Sbjct 2729 ATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCAGTTTCA 2670 Query 169846 GGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCA 169905 || || | | || || || || || ||||| || || || || || |||||| || Sbjct 2669 GGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCAAATGCT 2610 Query 169906 ATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAAC 169965 || ||| | || || ||| | | || || || | | || || || ||||||||| Sbjct 2609 ATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTGTATAAC 2550 Query 169966 GGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGT 170025 || || ||||| ||||| ||| | | || ||| | ||||| | | | || | ||| Sbjct 2549 GGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATATCTTGGT 2490 Query 170026 AGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCT 170085 | |||| ||| || ||||||||||| ||||||||||| || | ||||| | ||| Sbjct 2489 CGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCTTTCTCT 2430 Query 170086 GCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTC 170145 || ||||| ||||||||| |||||||| |||| || || |||| || |||||||| Sbjct 2429 GCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGATCTTTT 2370 Query 170146 TCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCA 170205 ||||| |||||||||||||| || || || ||||| ||||||||| | |||||||| ||| Sbjct 2369 TCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTCCAGGCA 2310 Query 170206 GAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGA 170265 ||||| || || | |||||||| ||||| ||||| || || || || | || |||||| Sbjct 2309 GAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTTGGAGGA 2250 Query 170266 GCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACA 170325 | | || || ||||| || || | || ||||| || |||| ||| | Sbjct 2249 TCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATGACTAGT 2190 Query 170326 GATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATT 170385 || | || |||| || ||||| || ||||||||||| ||| | |||||||| || || Sbjct 2189 GAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATATAATATC 2130 Query 170386 GTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGT 170445 || || || || |||||||| || | || ||||| |||| || || ||||| || Sbjct 2129 GTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAATAACTCA 2070 Query 170446 CGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATG 170505 ||| | | |||||||||||||| | | || ||||| | ||||| ||||| ||||| Sbjct 2069 CGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACAGCAATG 2010 Query 170506 GGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGAT 170565 || ||| | || ||||| || || || |||||||| || |||||||| |||||| | ||| Sbjct 2009 GGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATCATTGAT 1950 Query 170566 GGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATG 170625 | | || ||| || | | || || || | | || | ||||| ||||| ||| Sbjct 1949 GCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTAGGAATG 1890 Query 170626 GAAGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGC 170672 |||||||||||||||||||| || ||||| ||||| || || || || Sbjct 1889 GAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581779275336000