Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq37644 150 4e-31 seq9473 113 1e-19 seq8271 87.8 4e-12 seq57105 86.0 1e-11 seq44056 86.0 1e-11 >seq37644 Length=6317 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000 || ||||| || || | ||||||||| |||| ||||||| |||||| || || ||||| Sbjct 4531 AGGGTGGATTCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTG 4472 Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060 |||||||||||||||| || || || || || | |||||||||||||||||||||| Sbjct 4471 CCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTGTCTTGAATTTTTTCT 4412 Query 195061 TTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120 || || ||||| | ||| ||| ||| || || | || |||||||| || |||| | Sbjct 4411 TTCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTCCCGGTCAGA 4352 Query 195121 GTTTTTACGAACACTTGCATT 195141 ||||||||| | | |||||| Sbjct 4351 GTTTTTACGTAAATCTGCATT 4331 >seq9473 Length=1265 Score = 113 bits (124), Expect = 1e-19 Identities = 130/174 (75%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 194974 AGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGA 195033 ||||| | || || ||||||||||| || |||||||| || || || || || || ||| Sbjct 1264 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGA 1205 Query 195034 ATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACT 195093 || || || ||||| || || ||| |||||||||||| || | ||| || ||||| Sbjct 1204 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACA 1145 Query 195094 TCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGT 195147 || || || | ||||||||| || | ||| || ||||| | ||||||| |||| Sbjct 1144 TCGAGAGTGATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATTT-TGGT 1092 >seq8271 Length=1924 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| || | ||||||||||||||| ||||||||||| || || |||||| Sbjct 1242 TTCTGGATGTTGTAGTCAGAAAGAGTTCTCCCATCCTCGAGCTGCTTGCCCGCAAAGATA 1301 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGAC 195065 || || || || || || || || || || ||||| || || || |||||| Sbjct 1302 AGGCGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGAC 1354 >seq57105 Length=498 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || || || ||||| || || ||||| ||||| || ||| ||||||||| Sbjct 497 AGGCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCA 438 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 |||| ||| ||| ||||| ||||| || | ||||| || |||| ||| || ||||| Sbjct 437 ATGGAGTCAGAAGGCTCCACATCAAGAGTGATAGTCTTCCCGGTCAGAGTCTTGACGAAA 378 Query 195133 ACTTGCATTT 195142 | ||||||| Sbjct 377 ATCTGCATTT 368 >seq44056 Length=2137 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||| | || | ||| |||||| ||| || || || ||||| || | || || || Sbjct 446 GAGTCTGAGGACGATGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTCCT 387 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || | |||||| || ||||| ||||| || || || || || ||||| ||||| || Sbjct 386 GCCTTCCTGGAGCTGTTTGCCTGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTC 327 Query 195042 TTTGTCTTGAATTTT 195056 ||||||||||| || Sbjct 326 CTTGTCTTGAATCTT 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107396367471230