Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq13327 435 3e-117 >seq13327 Length=3816 Score = 435 bits (482), Expect = 3e-117 Identities = 674/960 (70%), Gaps = 2/960 (0%) Strand=Plus/Plus Query 83968 CTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAA 84027 || |||| | ||| | ||||| || || |||||||| || ||||| |||||||| || | Sbjct 1838 CTTACGCTAAATCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTA 1897 Query 84028 GCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAA 84087 | |||||||| | | |||||| || | | ||||| || ||| | | Sbjct 1898 GATTTGCACGATTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGA 1957 Query 84088 GACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAG 84147 || ||||| || |||||||| ||||| || ||||| || |||| |||| || | Sbjct 1958 TTGATTGGTTGAAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTG 2017 Query 84148 CAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGT 84207 || || || ||||| || || ||| || | ||| ||||| | |||||| || | Sbjct 2018 TTAATCAGATTCCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTAT 2077 Query 84208 TGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTAT 84267 | || || | || ||||| ||||| |||||||| ||||| || || || ||||||| Sbjct 2078 TAAAACTTGCGAATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTAT 2137 Query 84268 AAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTT 84327 | ||||| | ||| || ||||| || || ||||| || |||| ||| ||| |||| Sbjct 2138 ATGTTTCATATTCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCA 2197 Query 84328 CTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGA 84387 |||| || || || || | || |||||||| ||| |||| || ||| || | Sbjct 2198 TAGAAATTAAAGTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAA 2257 Query 84388 ATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGA 84447 |||| || || ||||| |||||| || || ||||| | ||| ||||| || ||||||| Sbjct 2258 ATACTCCTGCCACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGA 2317 Query 84448 AGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAAC 84507 | || |||||| ||||||| ||||| || || || || ||||| ||||| || ||||| | Sbjct 2318 ATACTAGCATGAAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATC 2377 Query 84508 CTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAG 84567 |||| |||| || || || || |||||||| ||||| ||||||||||| |||||| ||| Sbjct 2378 CTTGTCCGATTGGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAG 2437 Query 84568 CAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGT 84627 | || | || || |||||||| || | ||| || | ||| || |||||||| | | Sbjct 2438 CTACGAAAATTCAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGAT 2497 Query 84628 AAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATA 84687 | | | | || || | ||| || | ||||| | ||| |||||||| || ||||| | Sbjct 2498 ATGATGCTACCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACA 2557 Query 84688 GCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAG 84747 ||||| || |||| || || || | | ||| ||||| | |||||||||||| | Sbjct 2558 ATCATTCCTCAATACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTG 2617 Query 84748 AGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTG 84807 | || |||||||| || || || || || |||||||| | ||||| || | |||| Sbjct 2618 AACTCGGTACTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTG 2677 Query 84808 GCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAAACA-G 84866 ||||||| || || |||||||| ||||| ||||| | || || ||| |||||||| | Sbjct 2678 GCTCACGAATTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACG 2737 Query 84867 ACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGG 84926 | | || | || || ||||| | ||| | ||||||||| || | ||| | |||| Sbjct 2738 ATACTGCTAATAA-TAACGTTGGCACCATTAATAATCCAAACCATCCGATATATAGACGG 2796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570226098445200