Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq37644 120 2e-21 seq52741 104 2e-16 >seq37644 Length=6317 Score = 120 bits (132), Expect = 2e-21 Identities = 140/186 (75%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| || | ||||||| ||| |||||||| || || || || |||||||| Sbjct 4514 AATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTGCCTGCGAAGATAAGTCT 4455 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||||||||||| || | |||||||| ||||||||||||| ||| || || ||||||| Sbjct 4454 CTGCTGATCAGGCGGGGTCCCTTCTTTGTCTTGAATTTTTTCTTTCACCGCTTCAATTGA 4395 Query 563412 ATC---AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAAT 563468 || || | | ||| || | ||| || || || || || |||||||| ||| |||| Sbjct 4394 GTCGGAAGGTTCA--ACA-TCTAAAGTGACCGTCTTCCCGGTCAGAGTTTTTACGTAAAT 4338 Query 563469 TTGCAT 563474 ||||| Sbjct 4337 CTGCAT 4332 >seq52741 Length=4446 Score = 104 bits (114), Expect = 2e-16 Identities = 145/203 (71%), Gaps = 9/203 (4%) Strand=Plus/Minus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 || || || ||| | | || || || || ||||| || ||||||||||| ||||||| Sbjct 1749 GGACAGGACGTTTCAAAGGCCGTTATTACGGTACCGGCCTATTTTAATGATGCACAACGC 1690 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 ||||| || || || || || ||||||||||||| || ||||||||||||||| Sbjct 1689 CAAGCAACCAAGGAGGCAGGGGAAATTGCTGGACTTACCGTAGAACGTATTATCAATGAA 1630 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGAT---AAACATAATGATCAAGAACTTAAT 550558 || ||||| || | | || ||||| || ||| ||||||| |||||| || Sbjct 1629 CCGACTGCAGCATCCTTGGCTTATGGGCTGGATAAAAAACATACCGATCAA------AAG 1576 Query 550559 GTACTCATCTTTGATTGTGGAGG 550581 ||| | ||||||| | |||||| Sbjct 1575 GTAGTGGTCTTTGACTTTGGAGG 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4021538371228100