Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq13327 419 7e-113 >seq13327 Length=3816 Score = 419 bits (464), Expect = 7e-113 Identities = 671/958 (70%), Gaps = 8/958 (1%) Strand=Plus/Minus Query 25831 CCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCCTGCTTACTCGCAGCCACTA- 25889 |||||| ||| | |||||||| || | | ||| | || ||| | ||| | || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGC-AGTAT 2738 Query 25890 CATGTTTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGC 25949 | ||||| || ||| || | || |||||||| |||||||| ||||| || ||||||| Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 25950 CAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCT 26009 ||||||| ||||| | | |||||||| ||||| || |||||||| || || || | Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 26010 CTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC--TG-GCACACTGGACGAGT 26066 | || || || || | ||||| || || | || || || || | | | || || | Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTA---TTGAGGAAT 2561 Query 26067 GGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCAG 26126 | | || || || ||||| || ||| || || | | || |||||||| || |||||| Sbjct 2560 GATTGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCAT 2501 Query 26127 CATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTG 26186 ||||| || | |||| ||| || |||| | |||||||| | || || || || | Sbjct 2500 CATATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCG 2441 Query 26187 TTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGAC 26246 | || | | |||||| | | ||||| || || || ||||||| || |||||| Sbjct 2440 TAGCTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGAC 2381 Query 26247 AAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCG 26306 |||| |||| |||||||||||||| || || ||||| || || ||||| ||| | | Sbjct 2380 AAGGATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAG 2321 Query 26307 TATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGG 26366 ||||||| ||||| |||||||| | |||||||| ||||| |||||||| || || || | Sbjct 2320 TATTCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAG 2261 Query 26367 TTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTG 26426 | || || ||| || | || ||||||||| ||| ||| ||||| || | | ||| Sbjct 2260 TATTTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTT 2201 Query 26427 CAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGA 26486 | || | || || | |||| |||||||| ||||| || || || || | || | Sbjct 2200 CTATGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAA 2141 Query 26487 CATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTT 26546 |||||||||| || || || ||||| ||||| ||| | |||| ||||| | || |||| Sbjct 2140 CATATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTT 2081 Query 26547 TTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGC 26606 |||||||| |||||| | || ||||| ||||| | ||| ||||| ||||| || || Sbjct 2080 TTAATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGAT 2021 Query 26607 TGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGT 26666 | ||| | ||||| || | || ||||| || || |||||||| || || || ||||| | Sbjct 2020 TAACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAAT 1961 Query 26667 CAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTA 26726 || | | |||| | ||| |||| | | || || ||| | ||||| || || | Sbjct 1960 CAATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAA 1901 Query 26727 ACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 | || || | ||||| ||||| |||||||| || || || || || || || ||||| Sbjct 1900 ATCTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGATTTAGC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146470810864560