Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq13327 392 1e-104 >seq13327 Length=3816 Score = 392 bits (434), Expect = 1e-104 Identities = 672/973 (69%), Gaps = 14/973 (1%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||| || || ||||| ||||| ||||||||||||||||| |||||||| |||| | Sbjct 1843 GCTAAATCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTT 1902 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 ||||| || | || || || ||| | | | || | ||| | | ||||| || ||| Sbjct 1903 GCACGATTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGAT 1962 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || ||||| || || || || ||||| ||||||||||| | |||||| || || | Sbjct 1963 TGGTTGAAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAAT 2022 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | | || || ||| || |||||||| |||||| || |||||||| Sbjct 2023 CAGATTCCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAA 2082 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 || || | || ||||| || | ||| ||||| || || || || || || ||||| || Sbjct 2083 CTTGCGAATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTT 2142 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 || | ||| || ||||||||||| ||||| || | |||||| || | || | | Sbjct 2143 TCATATTCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAA 2202 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | | || ||||| | | ||| ||||||||| ||||||| ||| || ||||| Sbjct 2203 ATTAAAGTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACT 2262 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 ||||| || || ||| ||||| || ||||| | |||||| || |||||||| || || Sbjct 2263 CCTGCCACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACT 2322 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 | ||| || ||||| || || ||||| || |||||||| ||||| || ||| |||||| Sbjct 2323 AGCATGAAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGT 2382 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 || | ||||| |||| |||||||| ||||||||||||| || || || ||||||| Sbjct 2383 CCGATTGGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACG 2442 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 | || || || | ||| |||| | ||||| | ||| || | || || | || | | Sbjct 2443 AAAATTCAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATGAT 2502 Query 36633 GAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCAC 36692 | | || || | || || | |||| || ||| || |||||||||||||| || || Sbjct 2503 GCTACCCCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCAT 2562 Query 36693 TCGTCGAGGGTTGCA----GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGA 36748 || || | | || || || || | | || || || | ||| || || || || Sbjct 2563 TCCTCAA----TACACATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGA 2618 Query 36749 TGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG 36808 || || | || || ||||| || || ||||| || || | | ||||| || || Sbjct 2619 ACTCGGTACTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGG 2678 Query 36809 CTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAA---TGCAATTAAAAATGC 36865 ||||||||| ||||| ||||| || || || || || ||||| ||||| ||| | | Sbjct 2679 CTCACGAATTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACACGA 2738 Query 36866 TGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 36925 | |||||| ||| | | || | ||||| || |||||||| || | ||| || || Sbjct 2739 T---ACTGCTAATAATAACGTTGGCACCATTAATAATCCAAACCATCCGATATATAGACG 2795 Query 36926 GTTGTTTGTACTT 36938 | || |||| || Sbjct 2796 GCGGTCTGTATTT 2808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150192316898260