Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10895 152 6e-32 >seq10895 Length=16309 Score = 152 bits (168), Expect = 6e-32 Identities = 389/589 (66%), Gaps = 15/589 (3%) Strand=Plus/Minus Query 37183 AATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCA 37242 |||| ||||| | |||||||| | ||||||||||| ||||| || || || |||| Sbjct 9529 AATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCGGGCA 9470 Query 37243 TTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTT 37302 |||| |||||||| || | |||||| || | ||||| || ||||||||||| |||| Sbjct 9469 TTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATCCCTT 9410 Query 37303 CAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtt 37362 | || || ||||| || | | ||| | ||| ||| |||| ||||||| Sbjct 9409 CCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTG---GGGAATC---AATCCATC 9356 Query 37363 tttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAA 37422 | | |||||| |||||| || | | || | ||||| || | || || | Sbjct 9355 TAAGCGCCCAATCCGCCTTTTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAAAGGA 9296 Query 37423 AGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGT 37482 ||||||||| | || ||| ||| || || || | | || |||| || | Sbjct 9295 TGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCGGAAT 9236 Query 37483 GAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACAT 37542 | || || || || |||||| || || ||||| || | || || || |||| || | Sbjct 9235 GGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGGACTT 9176 Query 37543 CGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAG 37602 |||| | ||| ||| || || |||||||| || |||||||| || ||||| || | Sbjct 9175 CGTTCACAAAATTCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAAAAAGG 9116 Query 37603 CAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTT---TTTCCAATCATTAA 37659 | | | || ||||||||| | | ||| || | |||||| ||||| ||| | Sbjct 9115 CCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTTCCAGTCAGATA 9056 Query 37660 TATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCAC---GTTTAT 37716 ||| | |||||||| || || |||||||||||| ||| ||| ||| | Sbjct 9055 AATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCC---TCACATTTTTTGT 8999 Query 37717 ACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATC 37765 || ||| | ||| | ||||| || || ||||||||||||||||| Sbjct 8998 ACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCTATC 8950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591230713107600