Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq30971 132 9e-26 >seq30971 Length=2415 Score = 132 bits (146), Expect = 9e-26 Identities = 232/334 (69%), Gaps = 13/334 (4%) Strand=Plus/Minus Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTT 23078 ||||||| | ||||| || ||||| ||||| |||||||| || | || | || | Sbjct 1700 GCGTAGACCTTGGCCGGCAGCGGCGTGGTGTTGGAGAACTCCAGGGTCA-CGTGACCCTC 1642 Query 23079 CCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTT 23138 ||| || || |||||||| || || || |||||||| ||||| |||||||| ||||| || Sbjct 1641 CCACTCCGGCTCCAGCGGTGTCACATTGACGATGATCCCGCAGCGCGCATAGGTCGACTT 1582 Query 23139 GCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAG 23198 ||| |||||||| || | ||||| ||||||||| ||||| || |||| ||||| Sbjct 1581 GCCCAGGCAGATCACCAGAACGTCGCGCGGAATGCGGAAGTACTCAACCGTGCGCGCCAG 1522 Query 23199 TGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGA 23257 |||| |||||||| ||||| ||| ||| || | || ||| ||| | Sbjct 1521 CACGAAGGAATTCGGCGGGATGATGCAGACCTCGGT-------ATCGCGCTC---AACAA 1472 Query 23258 AATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACCT 23317 | | | || | ||| ||||| || || || | ||||| | | |||||||| | || Sbjct 1471 AGCTCTGGTCCGAGAAGTTCTTGGGGTCCACCAGTGCGTTGTCGACATTGGTGAAGATCT 1412 Query 23318 TGAATTCGTTACCGCAACGAATATCGTAGCCGTA 23351 |||| ||| | | || |||||||||||| Sbjct 1411 TGAACTCGCTGGCCACCCGGGCATCGTAGCCGTA 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895947749935200