Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq9473 86.0 5e-12 >seq9473 Length=1265 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 48610 CGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCT 48669 |||| || | |||||| ||||| || ||||| ||||| ||||| | ||||| ||||||| Sbjct 1254 CGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCT 1195 Query 48670 TGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAA 48729 |||| |||||| || || | | ||| || || | |||||| || | || | Sbjct 1194 TGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGA 1135 Query 48730 TCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || | ||| || || || |||||||| Sbjct 1134 TCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380256565710870