Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq13327 495 4e-135 >seq13327 Length=3816 Score = 495 bits (548), Expect = 4e-135 Identities = 648/897 (72%), Gaps = 0/897 (0%) Strand=Plus/Minus Query 162579 AGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTAT 162638 ||||| | | || ||||| ||| || | || ||||| ||||| ||||| ||||| || Sbjct 2745 AGCAGTATCGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAAT 2686 Query 162639 CAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGT 162698 | || || ||| |||| || ||||| || || || || || ||||| || || || || Sbjct 2685 TCGTGAGCCAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGT 2626 Query 162699 TCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGA 162758 || |||||||||||||||||| | || || ||| | | || || || | |||| Sbjct 2625 ACCGAGTTCAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGA 2566 Query 162759 TGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAAT 162818 || || |||||||| || ||||||| |||| | || || | || ||| | ||||| | Sbjct 2565 GGAATGATTGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGT 2506 Query 162819 CACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGAT 162878 || |||| ||||||| |||| ||| | |||||| ||||| ||||||||||| || Sbjct 2505 AGCATCATATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAAT 2446 Query 162879 CTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTT 162938 | || || | |||||||||||| | ||||||| ||||| || | || || || | Sbjct 2445 TTTCGTAGCTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAAT 2386 Query 162939 CGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACAT 162998 ||| ||||| ||||| || || | ||||||||| || |||||||| || || |||| ||| Sbjct 2385 CGGACAAGGATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCAT 2326 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 | | || ||||| |||||||| || ||| |||||||||| ||||| ||| |||||| || Sbjct 2325 GCTAGTATTCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGC 2266 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 ||| ||||| || || || | |||||||||||||| || ||| | ||||| || || | Sbjct 2265 AGGAGTATTTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTT 2206 Query 163119 TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGA 163178 || |||| ||| | || |||| || || || ||||| |||||||| ||| | Sbjct 2205 AATTTCTATGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATA 2146 Query 163179 AGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 || || || || || || || || || |||||||| || || | ||||| || | || Sbjct 2145 TGAAACATATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGC 2086 Query 163239 ATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCAT 163298 | ||| || ||||||||||| | |||||||||||||| | || || || | || Sbjct 2085 AAGTTTTAATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAAT 2026 Query 163299 CTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAA 163358 ||| || || |||||||| | |||||||| ||||| || || || ||||| ||||| Sbjct 2025 CTGATTAACAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAA 1966 Query 163359 CCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAG 163418 |||||| || |||| |||| || || ||| | | ||| || |||||| | || | Sbjct 1965 CCAATCAATCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCG 1906 Query 163419 AGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGA 163475 ||| || || |||||||| ||||| |||||||| || ||||| ||||| || || Sbjct 1905 TGCAAATCTAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552070649883600