Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq303 432 4e-116 seq13327 417 9e-112 >seq303 Length=42796 Score = 432 bits (478), Expect = 4e-116 Identities = 689/986 (70%), Gaps = 2/986 (0%) Strand=Plus/Minus Query 164643 TTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTTCCCACTGCTTATCTGGCCATTGGC 164702 ||| | ||||| || || || |||||| | ||| |||| || |||||| |||| | || Sbjct 27674 TTTATATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGA 27615 Query 164703 GGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCC 164762 || || || || || |||| || || |||||||| | |||||||| || ||| | Sbjct 27614 GGATGATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGC 27555 Query 164763 TATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGATGCTATGGGT 164822 ||||| |||||| ||| ||| | || || ||||| || ||||| ||| || ||||| Sbjct 27554 TATCTAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGG 27495 Query 164823 CATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAA 164882 || || ||| | ||| ||| ||||| || ||||||| ||| || |||| ||| Sbjct 27494 CACTCGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAA 27435 Query 164883 CTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTCATG 164942 |||| || |||| ||||| | || | || || |||| | | || || Sbjct 27434 GTTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTTTGT 27375 Query 164943 CTCCGCCAGTTTGAGCTGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTC 165002 | | || ||||| | ||| | | | | ||||| || ||||| ||||| ||| Sbjct 27374 TTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTC 27315 Query 165003 TCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCCAGT 165062 | ||||| ||||| |||||||| ||||| | || || || | ||||| | ||| Sbjct 27314 ACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGT 27255 Query 165063 TGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAA 165122 || ||||| || || ||||| ||||| || || |||||||| | | ||| ||||| Sbjct 27254 TGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAA 27195 Query 165123 GGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTTGCAGGTATCTTGGGA 165182 || || || ||||| || || || || ||||||||||||||||| |||||||| || ||| Sbjct 27194 GGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGA 27135 Query 165183 GGAGCATTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACATTATACGAGGATGGA 165242 || || || | ||||| || ||||||| || || ||||||| ||||| | ||||| Sbjct 27134 GGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGT 27075 Query 165243 GAGCAGGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATG 165302 | | | | |||||| || ||| | || || ||||||||||||||| ||| Sbjct 27074 GTGTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATG 27015 Query 165303 GTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGG 165362 || || ||||| || || || || ||||| || || | || |||||||||||||| ||| Sbjct 27014 GTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGG 26955 Query 165363 CTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATT 165422 | ||||| || ||||| || || || || | || | || || || || |||| || Sbjct 26954 TTACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATG 26895 Query 165423 ATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCA 165482 ||||||| || | || | | || |||||||| ||| ||| ||| | ||||||| Sbjct 26894 GTTGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCC 26835 Query 165483 GAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGT 165542 |||||||| ||||| || || || || |||||||| || | | ||||||||| | ||| Sbjct 26834 GAAGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGT 26775 Query 165543 GCTTGGTTGGCACCTGC-TGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATT 165601 ||||| |||| ||| || ||||| |||||||| || || |||||||| ||||| || Sbjct 26774 GCTTGAATGGC-TATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTT 26716 Query 165602 GCCTAGAGGCAACGCCCTTTAATAAA 165627 ||| | || || || || ||| ||| Sbjct 26715 ACCTCGCGGAAATGCTCTCTAACAAA 26690 >seq13327 Length=3816 Score = 417 bits (462), Expect = 9e-112 Identities = 664/950 (70%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 162921 CCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTAT 162980 ||| || ||| |||| ||||| || || | ||| | ||||| | || |||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 162981 C-TGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGAGC 163039 | |||||||| | || || || || || || || || || ||||| || || ||||||| Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 163040 CCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTT 163099 | || | || || || | || || || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 163100 CCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGC 163159 | || || |||||| | || || ||| | | || || || | |||| || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 163160 TGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCAT 163219 |||||||||| || |||| |||| |||| || | || ||| | ||||| | ||| Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 163220 ATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGTAG 163279 || | || ||||| || ||| | || || ||||| ||||| || || || | |||| Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 163280 CATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAG 163339 | | ||||||||| |||||||||||||| || || || || || || || |||| |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 163340 GTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGTCT 163399 | ||||| || || | |||||| || || || ||||| |||||||||| |||||| || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 163400 TCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGTCT 163459 |||| |||||||| || ||| | |||||||| ||||| ||| ||||| || || || | Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 163460 TCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCGTG 163519 | || ||||| | || || |||||||| | | ||||| || | | | | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 163520 AGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACAT 163579 ||| | |||| ||| |||| || ||||| || || || || || ||| | || |||| Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 163580 ACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCA 163639 | || ||||| || || || || |||||||| ||| | ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 163640 ACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTTTA 163699 | ||| | | | ||||||||||| ||| || || || || |||||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 163700 CTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 163759 | ||| |||| | || || ||||| ||||| || || || ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 163760 TCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGGTC 163819 || |||||| | || ||||| | | ||| || || | | || || || || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 163820 TGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAT 163869 | || |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562176884797200