Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq83140 122 2e-22 seq23761 86.0 1e-11 >seq83140 Length=1468 Score = 122 bits (134), Expect = 2e-22 Identities = 303/449 (67%), Gaps = 11/449 (2%) Strand=Plus/Plus Query 213512 CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571 |||||| | || | ||||||||| | || || ||||| |||||| | |||| Sbjct 973 CACCTCATCAGGGGATGTGTACTCGACAATTTCAGTGCAGAGGTTGGATGACTTGATGCA 1032 Query 213572 GCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGA 213631 ||||||||||| ||||| |||||| |||| | || ||||| ||||||||||||| Sbjct 1033 CCCCAGGTTCTGTTGGTTGGACTTTCTGTTGCACGCGTCTTTGTACAGCATGTAGGGGGT 1092 Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCG 213691 |||||||| | |||| | |||| || | | ||| || || |||| | || | Sbjct 1093 ACCGGTCTCAATCTGGCTCTCCAGAATTTTGAACCACAGCCACTGGGCCCTCACGGTCTT 1152 Query 213692 CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAG-CTCGTTGAATTCGTGGCCCC 213750 ||| | || | | | |||| | | || || ||| | || || | |||| Sbjct 1153 CCTTCCCCTGCCTGTCTT---CTCGAATTCCTCATACTTTCTC-TCAAACTCCTCCCCCC 1208 Query 213751 AG-ACCCTGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTCCCCGTCATC 213808 || | | | | || || || || | |||| ||||| | ||||||| ||||| || Sbjct 1209 AGCATTCAGAC-AGCCCAGGGCACTCGTTCGGG-CACATCAACGTCCAGTCTCCGTCCTC 1266 Query 213809 TCTGACTC-TCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCC 213867 | |||| ||| |||||||||||| || | ||| || || ||| || ||||| | | Sbjct 1267 CTTCACTCGTCT-CATGAACAGGTCAGGAATCCAGAGACCGAAGAAGAGATCCCTCGCTC 1325 Query 213868 TCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCC 213927 | ||| ||| || ||| || |||| ||| || ||||||| || ||| | ||||| Sbjct 1326 TGTGCTCCTCCTTGCCGTGGTTCTTCCGCAAATCCAGGAAGTCAAGGAGGTCTGAGTGCC 1385 Query 213928 ACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 | ||||||| ||||||||| |||| |||| Sbjct 1386 AGGGCTCCAGGTAGATGGCGAAGGAGCCC 1414 >seq23761 Length=1799 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||| |||||||| | ||||| || ||||||||||| |||||||||||||||||||| Sbjct 1543 GTACACTTCAGAGTGGATGTTCTCCATGGCGATCTGGAATCCGTAGAAGGCCCTGGCCTC 1484 Query 48484 AAACACCTGCA-CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | || ||| | || ||| | ||| || || ||| ||||| || || || || | Sbjct 1483 AGGCATCTGGACCTCCTGAAG-GAACCTGGCCGCCAGGTTCTCCAGCACGATGCCGTCGG 1425 Query 48543 AAGCAGCAAAGAAGGC 48558 |||| || ||||| || Sbjct 1424 AAGCCGCGAAGAAAGC 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929824718169600