Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq7091 150 6e-32 seq36698 123 8e-24 >seq7091 Length=10687 Score = 150 bits (166), Expect = 6e-32 Identities = 316/469 (67%), Gaps = 4/469 (1%) Strand=Plus/Minus Query 45524 TTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAG 45583 ||||| | |||| |||||||| || | | ||| || || | |||| || |||||| Sbjct 9960 TTCGGACATCAGATGCGCTTTGACCTCGGTGCCGGTTTTCCCATGCTGACCACCAAAAAG 9901 Query 45584 TTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTT 45643 ||||| | | |||||||| | || || || ||||| || | ||||| || || | Sbjct 9900 CTGCATCTGAGGTCGATCATCCACGAGCTTCTGTGGTTCCTACAGGGCGACACCAACATC 9841 Query 45644 CGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGAT 45703 |||| || ||| || || ||| ||| ||||| || ||||||||||| |||||||| Sbjct 9840 GCCTATCTGAAGGCCAACGGCGTGCGGATCTGGGATGAATGGGCCGATGAGAACGGCGAC 9781 Query 45704 CTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTC 45763 || || || | ||||| ||||| |||||||| ||| | | | ||||| || Sbjct 9780 CTGGGGCCGGTTTACGGGGCGCAGTGGCGGTCCTGGCCGGCGCCGGACGGTCGCCATATC 9721 Query 45764 GACCAAATTGCGGC--GGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGC 45821 || || || | || | || | | || | |||||||| || || || || ||| | Sbjct 9720 GATCAGAT--CAGCCAGATCCTGGATCAACTGAAGCGCAATCCCAATTCCCGCCGGCTTG 9663 Query 45822 TTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACG 45881 | ||| || ||||| ||||| || | | | ||| ||||| || ||||||| | Sbjct 9662 TGGTGTCGGCCTGGAATGTGGCGGAGATCGAGCGCATGGCCTTGCCGCCGTGTCATTGCC 9603 Query 45882 CCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCG 45941 || ||||| |||||||| | |||||| | || ||| | | ||||| | || Sbjct 9602 TGTTCCAGTTCTACGTCGCCGAGGGCCGGCTTTCCTGCCAGCTCTATCAGCGCAGCGCCG 9543 Query 45942 ATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGAC 45990 | | ||||| || |||| || |||||||| |||||||||| |||| Sbjct 9542 ACATCTTTCTGGGCGTGCCCTTCAACATCGCCTCCTATGCGCTGCTGAC 9494 >seq36698 Length=9795 Score = 123 bits (136), Expect = 8e-24 Identities = 214/305 (70%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 45431 AAAACTATGAAACAATATCTAGACTTGCTGCAAGACATCT--TAGAAAACGGCGTGGAGA 45488 || || ||||||||||| | || || ||| ||| ||| | | |||||||| || | Sbjct 8678 AATACCATGAAACAATACCACGATTTACTG-AAG-CATGTTCTTGAAAACGGTAACGAAA 8735 Query 45489 AAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACT 45548 || ||||| |||| ||||| ||||| | || || || |||| |||| ||| || Sbjct 8736 AACAAGATAGGACAGGAACTGGCACTCTAAGTGTATTTGGTTATCAGATGCGATTTGACC 8795 Query 45549 TGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATG 45608 | || || || || | || || || ||||| |||||| | || || | | | Sbjct 8796 TTGGCGAAGGTTTTCCCATGGTCACTACCAAAAAATTGCATTTGAAATCCATTGTCCACG 8855 Query 45609 AACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGA 45668 |||| || |||||| | || |||||||| ||| || | ||| | |||||||| || || | Sbjct 8856 AACTTCTTTGGTTTCTTAAGGGCGATACTAATATTGGATATCTTCAGGAGAACGGGGT-A 8914 Query 45669 CG-ATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAA 45727 || || ||| |||| |||||||||||||| || || | || || |||||||| ||| Sbjct 8915 CGCATCTGGAACGAATGGGCCGATGAAAATGGAGACTTGGGACCCGTCTACGGCCACCAA 8974 Query 45728 TGGCG 45732 ||||| Sbjct 8975 TGGCG 8979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157475607676660