Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq7091 154 2e-32 seq36698 132 7e-26 seq5591 95.1 2e-14 >seq7091 Length=10687 Score = 154 bits (170), Expect = 2e-32 Identities = 215/299 (72%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 122361 CCATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAA-AAAGCA 122419 || |||| |||||||| || | |||||| || || || | ||||| | |||| Sbjct 10049 CCGTGAAGCAATATCTCGATCTCCTGCGTCTGGTGCGAGAGCA-GGGCAGTTACAAAGGT 9991 Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| ||||| || || |||| | | ||||| || |||||||||||||| Sbjct 9990 GACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCTTTGACCTCGGT 9931 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 ||||| || || | || ||||||||| | || || | || |||||||| |||||| Sbjct 9930 GCCGGTTTTCCCATGCTGACCACCAAAAAGCTGCATCTGAGGTCGATCATCCACGAGCTT 9871 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 ||||||||||| |||||| ||||||||| |||||||| | |||| ||| | ||| Sbjct 9870 CTGTGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACGGCGTGCGGATC 9811 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||||||||||| ||||| | || | || || ||||| ||||| ||| ||||| Sbjct 9810 TGGGATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGGCGCAGTGGCG 9752 >seq36698 Length=9795 Score = 132 bits (146), Expect = 7e-26 Identities = 213/306 (70%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 122360 ACCATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA 122419 |||||||||||||| | || |||||| | |||| ||| ||||| |||||||| | Sbjct 8681 ACCATGAAACAATACCACGATTTACTGAAGCATGTTCTTGAAAACGGTAACGAAAAACAA 8740 Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 || | || || || ||||| || |||| || || ||||| |||||||| Sbjct 8741 GATAGGACAGGAACTGGCACTCTAAGTGTATTTGGTTATCAGATGCGATTTGACCTTGGC 8800 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 ||||||| || ||||||| |||||||| | || | ||||| |||| || ||| Sbjct 8801 GAAGGTTTTCCCATGGTCACTACCAAAAAATTGCATTTGAAATCCATTGTCCACGAACTT 8860 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 || ||||| || | ||||||||| || || ||||| | || ||| || | ||| Sbjct 8861 CTTTGGTTTCTTAAGGGCGATACTAATATTGGATATCTTCAGGAGAACGGGGTACGCATC 8920 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGT 122659 ||| | |||||||| |||||| |||| | | || || || ||||| | ||||||||| Sbjct 8921 TGGAACGAATGGGCCGATGAAAATGGAGACTTGGGACCCGTCTACGGCCACCAATGGCGT 8980 Query 122660 GAGTGG 122665 | ||| Sbjct 8981 AATTGG 8986 >seq5591 Length=63835 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| ||||| |||| ||||||||| |||||| |||||||||||| ||| Sbjct 57393 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAGTCCC 57451 Query 169792 GTCAGTCCTGCCATTTT 169808 |||| ||| |||| ||| Sbjct 57452 GTCACTCCCGCCAGTTT 57468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 776206114524000