Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq9067 100 3e-16 >seq9067 Length=16314 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38599 CACCAAAGTCTCTAAAGAAATCCACCCTTTTTTGAAAGCAATTTCTTCCAAGCACGCAAT 38658 |||||||| ||| | ||| | || || ||| || || || || | || || || Sbjct 4528 CACCAAAGCCTCGGCGGTAATAAAGCCCTTGCGGAACGCGATCTCCTCGACACAAGCGAT 4587 Query 38659 CTTCAATCCTTGACAGTTCTCAATAGTCTGCACGAATTGACCAGCTTCCATCAGACTGGC 38718 ||||| || || | | ||| || ||||||||||| || | || || ||||| ||| | Sbjct 4588 CTTCAGGCCCTGGCGATGCTCGATGGTCTGCACGAACTGGGCGGCATCGATCAGGCTGTC 4647 Query 38719 GTGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTCCGAGAACTTCCACTTGTAACTTCCT 38778 ||| || || ||||| ||||||| | | || || |||| || || || || |||| | Sbjct 4648 GTGGGTGCCCGTGTCGAGCCAAGCATAGCCGCGCCCGAAAAGCTCGACCTGCAACTCGCC 4707 Query 38779 GTCTTCTAGGTAGCTGCGATTGATATCAGTGATCTCCAGTTCTCCACG 38826 | | || | ||||| ||| |||| ||| ||||| ||||| || || || Sbjct 4708 GGCCTCCAAGTAGCGGCGGTTGAGATCGGTGATTTCCAGCTCACCGCG 4755 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 39245 GGTGTGGTGATGATTAAAATATCCTTAATGTCAGCCAACATCAATACCGATAAAGGGTAG 39304 || ||||||||||| | || || | ||| | |||| ||||| |||||| | || ||| Sbjct 5165 GGCGTGGTGATGATCAGGATGTCGGTGATGCCGGCCATCATCAGTACCGAAAGCGGATAG 5224 Query 39305 TAGATCATGGGTTTGTCATACACAGGGAGCAATTGCTTGCTCACACTGCGTGTTACCGGA 39364 |||||||| || ||||| || || ||||| | |||||||| || || |||||| Sbjct 5225 TAGATCATCGGCTTGTCGTAGACCGGGAGAAGCTGCTTGCTGACCGCCAAAGTGACCGGA 5284 Query 39365 TGAAGGCGGGTTCCACTTCCTCCCGCCAAAATAATACCTTTCAT 39408 || || || || || ||| ||||||| ||| | || ||||| Sbjct 5285 TGCAGACGCGTGCCCGCTCCGCCCGCCAGAATGAGTCCCTTCAT 5328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471763773082800