Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq13327 405 6e-108 seq303 356 3e-93 seq11659 93.3 5e-14 seq6720 91.5 2e-13 >seq13327 Length=3816 Score = 405 bits (448), Expect = 6e-108 Identities = 622/887 (70%), Gaps = 0/887 (0%) Strand=Plus/Minus Query 160966 TGTTTCATCATTGCCTTCGTTGGTGCTCCCCCTGTGGACATCGACGGCATTCGTGAACCC 161025 |||||||| ||| || || | || || || || || || || || |||||||| || Sbjct 2735 TGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGCCA 2676 Query 161026 GTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCT 161085 || | || || || | || ||||| || || ||||| || || || | || ||| Sbjct 2675 GTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTTCA 2616 Query 161086 AACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTC 161145 || ||||| ||| |||| || || | | || || || || | || ||||| | Sbjct 2615 AATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGATTG 2556 Query 161146 TACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTAC 161205 || ||||| || |||| |||| ||||||| | || ||| | || || | | || Sbjct 2555 TATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCATAT 2496 Query 161206 ATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCA 161265 | ||||||||||| ||| | ||||||| | |||||||||||||| |||| |||||| Sbjct 2495 CTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCT 2436 Query 161266 TACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGT 161325 | |||||| || || || ||||| || || || || || || || |||| ||||| Sbjct 2435 TTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGA 2376 Query 161326 TCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATGCTTGTCTTC 161385 ||||| || |||| ||||||||| || || ||||| || ||||||| |||||| || ||| Sbjct 2375 TCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTATTC 2316 Query 161386 CAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTT 161445 || |||||||| || || | |||||||| ||||| ||| || || ||||| || ||| Sbjct 2315 CAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTT 2256 Query 161446 GGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAA 161505 || || ||| | || ||||| ||||| || || | ||||| || | | || | Sbjct 2255 GGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTATG 2196 Query 161506 ACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTAC 161565 || | ||| | || || | || ||||| || || ||||| || ||| | || || || Sbjct 2195 ACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACATAT 2136 Query 161566 AACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTCAAC 161625 || ||||| || || ||||| |||||||| ||||| || || |||| ||| || || Sbjct 2135 AATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAAT 2076 Query 161626 AACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACT 161685 ||||| || || | |||||||||||||| ||| || || ||||| ||||| || || Sbjct 2075 AACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAACA 2016 Query 161686 GCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAGTCTATC 161745 ||| |||| | || || ||||| ||||| || ||||| ||||| |||||||| || ||| Sbjct 2015 GCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAATC 1956 Query 161746 GTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTT 161805 ||||| | || || || | || || || | | || ||||| ||| Sbjct 1955 ATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTA 1896 Query 161806 GGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGA 161852 || |||||||| ||||| ||||| || || ||||| |||||||| || Sbjct 1895 GGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 356 bits (394), Expect = 3e-93 Identities = 666/974 (68%), Gaps = 6/974 (1%) Strand=Plus/Minus Query 162159 TTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGG 162218 ||||||||||| || ||| | | |||||||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 162219 CTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTT 162278 || || ||||||||||| || ||||||||| |||| || || || | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 162279 GAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCT 162338 || ||| || ||| | ||||| || || || || || || | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 162339 CTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTC--ATCCGCTGGTGCCAACTTG 162396 ||| | | | || ||||| || |||| ||||||| | || |||| ||| ||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCA--GGGACTTTTAACTCGATGGTATCAAGTTG 27431 Query 162397 GGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTC 162456 | || | || | |||| | || | || || |||| | | ||| || || || Sbjct 27430 GAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTA 27372 Query 162457 -GCCAGTTTGAACTGGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCA 162515 | || |||||| | ||| | | | ||||||| || ||||| ||||||||| | Sbjct 27371 AGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACC 27312 Query 162516 GGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGG 162575 ||||| ||||| || || || ||| ||| | || |||||||| || ||| || || Sbjct 27311 GGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGA 27252 Query 162576 TTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGG 162635 || || ||||| || || || || || || || |||| | || ||| | |||||| Sbjct 27251 TTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGG 27192 Query 162636 TTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGT 162695 || |||||||| || || |||||||| || |||||||| || |||||||| | || ||| Sbjct 27191 TTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGT 27132 Query 162696 GCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAA 162755 || || | ||||| || ||||||| ||| || ||||||| | || ||||||| | Sbjct 27131 GCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTG 27072 Query 162756 CAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTT 162815 |||| ||| || ||| | | || || ||||| || ||||| ||||| Sbjct 27071 TCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTA 27012 Query 162816 ACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTG 162875 || || || || || || || |||||||| || | |||||| ||||||||||||||| Sbjct 27011 ACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTA 26952 Query 162876 CATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATT 162935 |||||||||||| | || || || || | || | || || | || | || || || Sbjct 26951 CATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTT 26892 Query 162936 GGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAA 162995 || || || | ||| | | || ||||| ||||| |||||||| | || || || ||| Sbjct 26891 GGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAA 26832 Query 162996 GACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCA 163055 || ||||| || || ||||| ||||| || || || | || ||||||||| | || || Sbjct 26831 GATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCT 26772 Query 163056 TGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCA 163115 || | || ||||||||||||||| || || | ||||| || || || || || Sbjct 26771 TGAATGGCTATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCT 26712 Query 163116 AGAGGCAACGCTCT 163129 | || || ||||| Sbjct 26711 CGCGGAAATGCTCT 26698 >seq11659 Length=22639 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/73 (90%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 156603 TCTATGGGTCA-GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGG 156661 |||| ||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct 16970 TCTA-GGGTCGCGTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGG 17028 Query 156662 TTCGAGTCCTGTC 156674 ||||| ||||||| Sbjct 17029 TTCGAATCCTGTC 17041 >seq6720 Length=8428 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/88 (85%), Gaps = 4/88 (5%) Strand=Plus/Plus Query 157690 CGGGGTGTAGCGCAGCTTGGT-AGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748 |||||||||||| ||| ||| | |||| ||||||||||||| ||||||||||||||| Sbjct 50 CGGGGTGTAGCGTAGCCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCGA 109 Query 157749 ATCCTGTCACCCCGACTTATCAA-AACC 157775 |||||| ||||||||| ||||| |||| Sbjct 110 ATCCTGCCACCCCGAC--ATCAAGAACC 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546742837040400