Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq13327 327 3e-85 >seq13327 Length=3816 Score = 327 bits (362), Expect = 3e-85 Identities = 608/889 (68%), Gaps = 4/889 (0%) Strand=Plus/Plus Query 21477 TCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGG 21536 || || ||||| ||||| ||||| ||||||||||| || || | || || || ||||| Sbjct 1849 TCTAGAGGGAAATTGTGCGCGTTACGCTCATGCATTACTTCCATTCCTAGATTTGCACGA 1908 Query 21537 TTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTA 21596 || | || || || || | || || |||| || ||| | | | |||||||| Sbjct 1909 TTTAAGATATCGGCTCAACTCGAAATTACACGTCCTTCTGCATCAATGATTGATTGGTTG 1968 Query 21597 AAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATA 21656 || ||||| ||||| | ||||||||||| ||| | || | || | || || || Sbjct 1969 AAATTGAATCCATTTAGATTGAAAGCCATAGTACTAATTCCCATTGCTGTTAATCAGATT 2028 Query 21657 CCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCA 21716 || || || || || ||||| ||||| || | | ||| || |||||||| || || Sbjct 2029 CCAACTACCGGTCAAATTGCAAGGAAGAAGTGTAAAGAACGTGAGTTATTAAAACTTGCG 2088 Query 21717 TATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCC 21776 |||| ||||| || || || || || ||||| || || || ||||| || || || | Sbjct 2089 AATTGAAAGATTAGACGCCCGAAGTATCCGTGCGCGGCTACGATATTATATGTTTCATAT 2148 Query 21777 TCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGT 21836 || || || || || || ||||| || |||| | |||||| | ||| | ||| | Sbjct 2149 TCCTGTCCGAATTTATACCCATAATTAGGTGATTCATCTTCACTAGTCATAGAAATTAAA 2208 Query 21837 GACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCC 21896 | || || || | || ||||||||| || ||| || |||||||| || ||| Sbjct 2209 GTTGATGTAACTAAAGATCCATGCATAGCACTAAATAAAGATCCTCCAAATACTCCTGCC 2268 Query 21897 ACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATG 21956 || || |||||| ||||| ||||| | ||||| ||||| |||||||| || |||||| Sbjct 2269 ACTCCAGCCATGTGGAAAGGGTGCATTAAGATATTATGCTCTGCCTGGAATACTAGCATG 2328 Query 21957 TAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAAC 22016 ||||||| || || || || || | ||||| |||| |||||||| || ||||| | Sbjct 2329 AAGTTGAATGTTCCAGAAATTCCTAGAGGCATTCCATCTGAAAAAGATCCTTGTCCGATT 2388 Query 22017 GGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATC 22076 || ||||| || || ||||| | || || || || || |||||| | || || || || Sbjct 2389 GGGTAAACTAGAAATACAGCCGATGCTGCTGCAACTGGTGCAGAGAAAGCTACGAAAATT 2448 Query 22077 CAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACG 22136 || || | ||| |||| || || || | ||| ||||| || || | || | || Sbjct 2449 CAAGGACGCATTCCTAAACGGTAACTTAATTCTCACTCACGACCAAGATATGATGCTACC 2508 Query 22137 CCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCA 22196 || || | ||| || | ||| || |||| | || || ||||| |||| ||||| ||| Sbjct 2509 CCGATTAAGAAATGTAGTACAACGAATTGGTAAGGTCCTCCGTTATACAATCATTCCTCA 2568 Query 22197 AGTGTAGCA--GCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAA 22254 | | | || || || || | | || || || | || || ||||| ||||| | Sbjct 2569 A-TACA-CATCGCATCTCACACCGTATACAAATGCATACCAATAGCATTTGAACTCGGTA 2626 Query 22255 CGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGA 22314 | ||||||||||| || || || || || || | || ||||| | || || || || | Sbjct 2627 CTACGGCTCCTGAGATAATATTATTTCCGTATAGAAGAGAGCCTGAAACTGGCTCACGAA 2686 Query 22315 TTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACA 22363 ||||||| || || || || |||||| | ||||| || ||| ||||| Sbjct 2687 TTCCATCAATATCTACTGGCGGTGCGGCTACAAAAGCAGCAATGAAACA 2735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145953313888200