Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10895 156 5e-33 seq34284 113 5e-20 seq37582 89.7 6e-13 >seq10895 Length=16309 Score = 156 bits (172), Expect = 5e-33 Identities = 723/1128 (64%), Gaps = 41/1128 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||||| ||||| || || | || |||||| | || || || |||| | Sbjct 10501 CCCCAGCATATGTTGATGCGCGTTGCGGTTGGAATCCACTTAAATGATATGGACTCTGCC 10560 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || || |||||| || ||| |||| || |||||||| |||||||| Sbjct 10561 ATAGAAACCTATGAGCTGATGTCAAAAAAATAT-TTCACCCATGCAACACCTACCCTCTT 10619 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| | || || || | |||||||||||| |||||||| | |||| ||||| || Sbjct 10620 CAACTCCGGAACGCCCAAGCCGCAGATGTCCTCCTGCTTCCTATTGGCCATGAAGGACGA 10679 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | ||||| || | || | | | || ||| ||||||| | | || || Sbjct 10680 CAGTATCGATGGTATTTACGACACCTTGAAGCAGACCGCGAAAATCTCCCAATCTGCGGG 10739 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||| || || | ||| || |||| | || | ||| ||| || || || Sbjct 10740 GGGAATCGGACTTTCCATTCACAATGTTCGGGCTACGGGATCATATATAGCCGGTACCAA 10799 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 |||| || |||||||| | || ||||| | |||||||| | ||| || ||||| || Sbjct 10800 TGGTACTTCCAATGGTATTGTCCCTATGCTAAGGGTATTTAATGACACGGCACGCTACGT 10859 Query 75571 AAATCAAGCGGGGCG----TCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 |||||| | |||| || || || | || | || | || || ||||||| Sbjct 10860 TGATCAAG-GAGGCGGGAAGCGAAAAGGAAGTTTTGCCATTTATGTAGAGCCTTGGCATG 10918 Query 75627 CCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 | ||||| | || || | || || | || ||||| || | ||||| || Sbjct 10919 CGGATATTTTTGACTTTTTGGAATTGAAGA-AGAACCACGGAAAGGAAGAAATGCGTGCC 10977 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | ||||| || | || ||||||||||||| | ||||||||||| || |||| | Sbjct 10978 CGTGATCTGTTCTACGCCATGTGGATTCCAGATTTGTTCATGAAGCGCGTGGAGGCCAAT 11037 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCA---CCAGG--TCTCTCCGACGCGGTGG 75800 | | ||| | | | || || ||| | | ||||| | | | | | | Sbjct 11038 GAAGATTGGACCTTAATGTGCCC---CAATGAATGTCCAGGATTGTTTTCAAATC--ACA 11092 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA---AGAGG---AGGGTAGAGCCAATG 75854 ||||||| |||||| || || || ||||| ||||| ||||| | ||| Sbjct 11093 GTGAGGAATTTGAAAAACTATATTTGAAATATGAGGCAGAGGATAAGGGTCG---CAA-- 11147 Query 75855 CGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || ||| ||| ||| | ||| | || | |||| |||| ||||| |||| Sbjct 11148 -AACGGTAAAGGCCAGGGATTTATGGGAAAAAATATTGGAATCCCAGATTGAGACGGGAA 11206 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 | || ||||||||||| |||||||| || || || || || ||||| ||||| | Sbjct 11207 CGCCCTATATGCTTTATAAGGATGCGGCCAATCGTAAAAGCAATCAGAAGAACTTGGGTA 11266 Query 75975 CAATCAAGAGC-TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 | ||| || | || |||||||| || || || || || || || ||||| Sbjct 11267 CTATC-CGATCTTCCAATCTTTGTACCGAGATATTGGAATATACCTCCCCCGATGAAGTA 11325 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093 || ||||| || ||||| || || || ||||| | || ||| | ||| | ||| Sbjct 11326 GCGGTTTGTAACTTGGCCTCTATAGCTCTTCCCATGTTTGT---TAAAGGG---GGCAAA 11379 Query 76094 TTTGATTATGAAAAACTTCATGAA-ATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 |||||| | || | || | || | ||||| || ||||| || || || | || Sbjct 11380 TTTGATCA-CAAGGAATTGTTCAAGGTTACAAAACGGGTGACCAAGAACCTTAATAGGGT 11438 Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 |||||| || |||| || ||||| || ||| ||| || |||||||| || || || Sbjct 11439 CATTGATAGGAATTACTACCCCGTAAAGGAAGCGGAAAATTCCAATATGCGCCATAGGCC 11498 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA 76272 || |||||||| || ||||| || || ||| |||||| ||| || | | ||| Sbjct 11499 AATAGGTTTGGGAGTCCAAGGACTGGCAGATACCTTTATTATGTTGCGTTTGCCCTTTAC 11558 Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTA 76320 ||||| |||||||| |||| || ||||||||| |||| Sbjct 11559 CAGTGATGAGGCCAAGGAATTGAACCAAGAGATTTTTGAAACCTTGTA 11606 >seq34284 Length=3714 Score = 113 bits (124), Expect = 5e-20 Identities = 105/133 (79%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 160746 TCTTCTCAAACTCCACAGTGCGATCACCAAAGCCAGCGAGCCAGCCATCGCGAAGGCAAG 160805 ||| |||||||||| | || ||| ||| | || ||||||||||| |||||||| | Sbjct 2311 TCTCCTCAAACTCCGCCGTTCGAGGACCGGGGGCA---AGCCAGCCATCTCGAAGGCAGG 2367 Query 160806 CCTCAACGGCTTTAATTTCTTCCTCCCCATATGATTCAAATTTGTTGGGCGCATACCAAA 160865 ||| || ||||| || |||||||||||||| | |||||| ||||| ||||| ||||||| Sbjct 2368 ACTCCACAGCTTTTATCTCTTCCTCCCCATAGGCTTCAAACTTGTTTGGCGCGTACCAAA 2427 Query 160866 CTTTCTGGGGCAT 160878 ||||| ||||| Sbjct 2428 TTTTCTTCGGCAT 2440 >seq37582 Length=6673 Score = 89.7 bits (98), Expect = 6e-13 Identities = 217/322 (67%), Gaps = 9/322 (3%) Strand=Plus/Plus Query 175235 TTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCCCCCG 175292 ||||||| ||||| || | || ||| |||| ||| | ||||||||| |||| Sbjct 2350 TTGTGGACTTTCTGAAAGATCCGCAGAAATATGA--GAATTTGGGTGCCAAGTGCCCCAA 2407 Query 175293 AGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGC 175352 ||| || | || | ||| || || ||||| |||||||| || || || | || Sbjct 2408 AGGTGCGTTGCTTGTTGGTCCCCCCGGGACGGGGAAGACCCTTCTGGCAAAGGCTGTGGC 2467 Query 175353 GGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTG 175411 || || || ||||| ||| || || || || | | | || || ||| | |||| Sbjct 2468 TGGCGAGGCATCAGTCCCGTTCTATTCAATG-TCGGGATCTGATTTCGTCGAGGTCTTTG 2526 Query 175412 TTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCAT 175471 | || |||||| || || || || ||||||||| || ||||| || | ||| | Sbjct 2527 TCGGAGTGGGTCCCTCCAGAGTGCGTGATCTCTTTCAACAAGCCCGTAAACACGCACCGT 2586 Query 175472 GTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGC-GCTGGTGGTATG 175530 ||| |||| ||||||||||||||||| ||||| | | | | | | | || ||| || Sbjct 2587 CGATTATCTTTATTGATGAGATTGATGCAGTGGGGAGGAAGAGAAACAGAGGGGGGTTTG 2646 Query 175531 C--CAGCAAATGACGAGAGAGA 175550 | || ||||||||||||||| Sbjct 2647 CAGGAGGAAATGACGAGAGAGA 2668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595475715067200